Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2766 ATGGCTAYATACACTTCAATTTTGATAGTATTAATCCAACTTCTCTTGTGTGCCTCCAGCAATTCCCATACCATTTTACCACCTGGAACTCAAAGAAATGCAACATCCAAAGTGTCACTCTTGGATAAAGAAGCCTATGCTTTGCTTTCTCTTCACTGGTGGAGTATCCAATACAATATCTCAAACCGCTGCAACAATTGGCCTGGTGTTGAGTGCAATAACAATGGAAGTATTACAAAGCTTTCACCTCCAAAAGTTTCCACCTATACCTTTAAAAGAGACCTCTATGTTAGGGACATTGATTTCTCAGTCTTTTCAAATCTTGTCCGCCTTGATCTCAGTCAAATGGATCTATATGAACTCCCTTTGGGACTAAGTAGTCTCAAGAAGCTAACATTACTTAACATATCCTCCAACAATCTTCAAGATGAAATCCCTTTCTCATTAGCAAATTTCCCTCAACTTATGGTGTTTGATGTCTCTAACAACCTATTTAATGGTCAGATTCCACATGAAATTGGCATGTTGGAGAATCTTGTCACATTGGACTTGAGTTTCAACATGTTCAGTGGATCCATTCCATTGAGTTTGAGTCATGTGACTAGTCTCAACCACTTGAGGACATCCAATAACCAACTAGATGGTGAGCTTCCTTCAATGATTCTAAGTCTTTCTCAGTTGAAGACTTTTGACCTTTCTCGCAATCGTTTTCTTGGTAAGCTCCCTACAACATTTGTAAATAATTCCCAGTTAAGGAATCTAAACCTTTCTGACAATCGAATAGGCGGTTTCATCCCATGTGAAATAGGGAAGTTAGATAATCTGGTGGTTTTAGACCTGAGTTTGAATCAGCTAGCAGGTCCAATTCCTGATCAAATAGGGTGTCTAAAAAATTTGACAAGTCTCCACCTTGATTCAAATTGGATTAATGGTTCTATACCTTCAAGTATAGGACTTTTAACCCATTTGAAAGAGTTGACACTTGGATTCAACCATATACATGGGTTGATTCCTGCAGAATTAGAGCACTTGGTTAATCTGAAAGTTTTGGATATTTCAAACAATGCAATTTTTGGTAGTATACCAAAATGGATATCTGCATTAACACAATTAACAGATATAAGACTTCAGGGGAACCAGCTTTGTGGTGTTATCCCATATGGTATCCTTATTCATAGTATTCATGTGGATCTTAGCCGCAACCATTTAAATGGAAGCATTCCTTCTCAAATTGGCTATAATCTTTCATATCTAGACCTTAGAGACAATAACTTGAGTGGCAAGAAACCAAAGGAGCTCGATTCTATTCGATTCTACTATCTATATTGCAATCCCTTTCTTGATGATGGATATTATGACTGCAGCGATTCACAAGATCAAAGAGATTCTGACCATCATAATAACCATTTCAGTCCATCATCTATGGTTTTGGTTTTGGTTTTGATAATTGTGGCCAGCGTTCTCATTTCTTTTGGCTCCACAGGGATTGGAATTTGTGTTCTCCGTGCCAGGTATAGTCGCAAACACAAAAATAAGGCAGCAAAGCATGGAGATTTATTCTCCATTTGGAACTATGATGGTAAAATTGCATTTGAGGACATCATTGAAGCAACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGTGCTTATGGTAGTGTCTACAAAGCGAAACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTATTGTTTGCATAACCGATGCATGTTTTTGGTGTATGAATACTTGGAAAGAGGAAGCTTGTTCTATAACTTGGCCGATGAGATTGAAGCTCAAGAGTTGAATTGGAGCRAGAGGGTGAACATCATTAAAGGGACAGCATATGCTCTTGCTCACATGCATCATCATTGTACTCCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATATTTTGCTCAATTCAGAGTTAGAAGTTTGTGTATCAGATTTTGGCACTGCAAGACTTCTTGATCCTGATTCATCTAATCAAACTCTTCTAGTTGGCACCTATGGATATGTTGCTCCAGAATTGGCATACACCATGAGTGTGACTACAAAGTGTGATGTTTATAGTTTTGGAGTGGTGGCTTTAGAAACAATGATGGGGCATCATCCAGGAGAATTCATTTCCACTCTGACAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTATTGGATCCACGGATTCCACTTCCGAAATCTCGGAAAGATATGCAAGATGTTGTGCTTGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGATCCAAATTCCAGGCCATCAATGCAAGTTGTGGCCAATGAGTTTTTGGCTTCAAAGGCACCAATACATGTCTCTTTCTCTGATGTCTCAATCCAACCCAACCAAATAGAAGGTAGCATCCCCCTTGAAACAGTTCATTTGGTTAATCTCAAATTCTTATATCTTTCTTTTAAAAAGAATTTTGGTAATATACCAGAAGAGATCTCTGCATTAACACAATTAACTGACATAAGACTTCAGAGGAATCAAGTTAGTGATTTTCTCCCATCTGATATTCTTGTACACTCTAGTTTTGTGGACCTTAGCCACAACAATTTATATGGAAGGATTCCTTCTCAAATTGGCAATACTCTTTCATTTTTAGACCTTAGTTAA 2754 0.3824 MAXYTSILIVLIQLLLCASSNSHTILPPGTQRNATSKVSLLDKEAYALLSLHWWSIQYNISNRCNNWPGVECNNNGSITKLSPPKVSTYTFKRDLYVRDIDFSVFSNLVRLDLSQMDLYELPLGLSSLKKLTLLNISSNNLQDEIPFSLANFPQLMVFDVSNNLFNGQIPHEIGMLENLVTLDLSFNMFSGSIPLSLSHVTSLNHLRTSNNQLDGELPSMILSLSQLKTFDLSRNRFLGKLPTTFVNNSQLRNLNLSDNRIGGFIPCEIGKLDNLVVLDLSLNQLAGPIPDQIGCLKNLTSLHLDSNWINGSIPSSIGLLTHLKELTLGFNHIHGLIPAELEHLVNLKVLDISNNAIFGSIPKWISALTQLTDIRLQGNQLCGVIPYGILIHSIHVDLSRNHLNGSIPSQIGYNLSYLDLRDNNLSGKKPKELDSIRFYYLYCNPFLDDGYYDCSDSQDQRDSDHHNNHFSPSSMVLVLVLIIVASVLISFGSTGIGICVLRARYSRKHKNKAAKHGDLFSIWNYDGKIAFEDIIEATEDFDIRYCIGTGAYGSVYKAKLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHRNIIRLYGYCLHNRCMFLVYEYLERGSLFYNLADEIEAQELNWSXRVNIIKGTAYALAHMHHHCTPPIVHRDVSSNNILLNSELEVCVSDFGTARLLDPDSSNQTLLVGTYGYVAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFISTLTKPSTQQLLVKDVLDPRIPLPKSRKDMQDVVLVVKLALACLSSDPNSRPSMQVVANEFLASKAPIHVSFSDVSIQPNQIEGSIPLETVHLVNLKFLYLSFKKNFGNIPEEISALTQLTDIRLQRNQVSDFLPSDILVHSSFVDLSHNNLYGRIPSQIGNTLSFLDLS* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2766 917 SMART LRR_typ_2 864 888 IPR003591 -
Amo12g2766 917 SMART LRR_typ_2 272 296 IPR003591 -
Amo12g2766 917 SMART LRR_typ_2 200 224 IPR003591 -
Amo12g2766 917 SMART LRR_typ_2 176 199 IPR003591 -
Amo12g2766 917 SMART LRR_typ_2 344 368 IPR003591 -
Amo12g2766 917 SMART LRR_typ_2 105 128 IPR003591 -
Amo12g2766 917 SMART LRR_typ_2 320 343 IPR003591 -
Amo12g2766 917 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 822 916 - -
Amo12g2766 917 Gene3D Phosphorylase Kinase; domain 1 501 619 - -
Amo12g2766 917 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 46 824 - -
Amo12g2766 917 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 46 824 - -
Amo12g2766 917 SUPERFAMILY L domain-like 78 432 - -
Amo12g2766 917 Gene3D Ribonuclease Inhibitor 291 390 IPR032675 -
Amo12g2766 917 Pfam Leucine rich repeat 322 381 IPR001611 GO:0005515
Amo12g2766 917 Gene3D Ribonuclease Inhibitor 391 473 IPR032675 -
Amo12g2766 917 ProSitePatterns Protein kinases ATP-binding region signature. 547 569 IPR017441 GO:0005524
Amo12g2766 917 Gene3D Transferase(Phosphotransferase) domain 1 620 818 - -
Amo12g2766 917 SUPERFAMILY L domain-like 824 914 - -
Amo12g2766 917 SUPERFAMILY Protein kinase-like (PK-like) 526 806 IPR011009 -
Amo12g2766 917 Gene3D Ribonuclease Inhibitor 819 917 IPR032675 -
Amo12g2766 917 Gene3D Ribonuclease Inhibitor 37 192 IPR032675 -
Amo12g2766 917 Gene3D Ribonuclease Inhibitor 193 290 IPR032675 -
Amo12g2766 917 Pfam Protein kinase domain 546 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2766 917 ProSiteProfiles Protein kinase domain profile. 541 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2766 917 ProSitePatterns Tyrosine protein kinases specific active-site signature. 665 677 IPR008266 GO:0004672|GO:0006468
Amo12g2766 917 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 822 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2766 Amo-Chr12 113463890 113467067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2766 820 917 Receptor kinase-like Gene Family AT4G08850 33.000 3.07e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2766 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2766 - - aip:110269304 1345.87