Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2762 ATGGTTATATCATGCACTTGCATTATTATTTTGATGTTAGTGCCACTTCTCTTTGTTGGCATCACCACCAATGCTGGAACTCACAAATTGTCACCCTTGGATCAAGAAGCCAATGCTATGCTTTCAATTAGTAAAGAGTTGTGGAGTAACCAACATAATAATGTCTCAAACCGTTGCAACTGGCCCGGAGTCAACTGCAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAACTCCAAGTAATTTCACCGACGAGTTCAGGACACAACTCTGCTCTTTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATGGGGTTATGTGAGTTCCCCAAACTAAGGGGTCTCAAGAAGCTACAACATCTCAACCTATCATACAACTATTTAGGAGGTGAGGTTCCTTTTACATTATTGGAAAATCTAACTCAACTTCTTGTGTTGGACTTGAGTGCCAACAGCTTCCGTGGAAGCATTCCATTGATTTTTGGTCAAATGAGCAGTCTCACACACATGAACCTTTCCAACAATCTACTATTTGGTGAGGTTCCTTTCACATTGCCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACGAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTGACAAATTTATTAACCTTAGACCTCAGTTCAAATTCCCTGTCTGGTCCAATTCCTGAGCAAATTGGGTACTTGAACCGTTTGACAAGTCTCCACCTTCATTCAAATTTGCTTAGTGGTTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTTCTTGTCTGGTCCAATTCCTGAGCAAATAGGGTACTTGACCCGTTTGGAAGTGCTCAGCATCGGATCCAACAGGATAGATGGTTGTATCCCCAAAGAAATAGAGCATTTGTTGCATCTAGAAGTTTTAAATCTTTCTTATAATGCTATTTCTGGTGTTATCCCATCTTCTATCTTTATTCTCTCTAGTTATGTGGATCTCAGCCATAACAGTTTAAACAGGAACTTGAGTCTGTTATTCCACTGTTATCTGGATTACAATCCCTTTCTTGACAACGAATATTATGACTGCGATGATCATTTAAACGACCATCATAATAAGCATTTTGGCCGATCACTGGTTTTGGTCATAATCGTGGTCTGCGTTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCGTGCCAGGCATCATGGCAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGGCAAAATTGCATTTGAGGACATCATTCAAGCCACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACTGCAACATCATTAAGCTTTATGGCTATTGTTTGCATAACCGATGCATGTTTTTGGTGTATGAATACTTGGAAAGAGGAAGCTTGTTCTGTAACTTGGCCAACGAGATCGAAGCACAAGAGTTGAATTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGCCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATGTTCTGCTGAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTCGGCACAGCGAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTTTAGTTGGCACTTATGGATATATTGCTCCAGAATTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAATGATGGGTCATCACCCAGGAGAATTCATGTCCACTATGTCAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCGCGGATTCCACTTCCGAAATCTCGGAAAGATATGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGCTTTCAGCTTCCAAGGCTTCCACGAATTTGTCTTTTTATGATGTCTCAATCTACCAACTGATGCAATATCAAACTCCTGAACCGTTGACCCAACTAAAAGACCCAAAGAGTTCAACAACTGAAGGAGCCTCAACATTTCTCCCAGCTTAG 2313 0.4051 MVISCTCIIILMLVPLLFVGITTNAGTHKLSPLDQEANAMLSISKELWSNQHNNVSNRCNWPGVNCNKAGSITLLSPPTPSNFTDEFRTQLCSLKLNFSVFQNLVHLDLSEMGLCEFPKLRGLKKLQHLNLSYNYLGGEVPFTLLENLTQLLVLDLSANSFRGSIPLIFGQMSSLTHMNLSNNLLFGEVPFTLPNLTQLLVLDLSQNELSGFIPHEIGKLTNLLTLDLSSNSLSGPIPEQIGYLNRLTSLHLHSNLLSGFIPHEIGKLTNLLTLDLSSNFLSGPIPEQIGYLTRLEVLSIGSNRIDGCIPKEIEHLLHLEVLNLSYNAISGVIPSSIFILSSYVDLSHNSLNRNLSLLFHCYLDYNPFLDNEYYDCDDHLNDHHNKHFGRSLVLVIIVVCVTISLGSVGIGICIFRARHHGKLENKATKNGDLFSIWNYDGKIAFEDIIQATEDFDIRYCIGTGAYGSVYEARLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHCNIIKLYGYCLHNRCMFLVYEYLERGSLFCNLANEIEAQELNWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFMSTMSKPSTQQLLVKDVLDPRIPLPKSRKDMQDVVHVVKLALACLSSDPKSRPSMQDVANELSASKASTNLSFYDVSIYQLMQYQTPEPLTQLKDPKSSTTEGASTFLPA* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2762 770 Gene3D Ribonuclease Inhibitor 34 190 IPR032675 -
Amo12g2762 770 Gene3D Ribonuclease Inhibitor 246 388 IPR032675 -
Amo12g2762 770 Gene3D Transferase(Phosphotransferase) domain 1 534 739 - -
Amo12g2762 770 SMART LRR_sd22_2 123 150 - -
Amo12g2762 770 SMART LRR_sd22_2 268 283 - -
Amo12g2762 770 SMART LRR_sd22_2 220 246 - -
Amo12g2762 770 SMART LRR_sd22_2 292 318 - -
Amo12g2762 770 Pfam Leucine rich repeat 294 351 IPR001611 GO:0005515
Amo12g2762 770 Pfam Protein kinase domain 460 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2762 770 Pfam Leucine Rich Repeat 125 154 IPR001611 GO:0005515
Amo12g2762 770 ProSitePatterns Tyrosine protein kinases specific active-site signature. 579 591 IPR008266 GO:0004672|GO:0006468
Amo12g2762 770 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 231 741 - -
Amo12g2762 770 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 41 253 - -
Amo12g2762 770 Gene3D Ribonuclease Inhibitor 191 245 IPR032675 -
Amo12g2762 770 Gene3D Phosphorylase Kinase; domain 1 417 533 - -
Amo12g2762 770 PRINTS Leucine-rich repeat signature 199 212 - -
Amo12g2762 770 PRINTS Leucine-rich repeat signature 220 233 - -
Amo12g2762 770 SUPERFAMILY Protein kinase-like (PK-like) 436 722 IPR011009 -
Amo12g2762 770 MobiDBLite consensus disorder prediction 750 770 - -
Amo12g2762 770 SMART LRR_typ_2 123 147 IPR003591 -
Amo12g2762 770 SMART LRR_typ_2 196 219 IPR003591 -
Amo12g2762 770 SMART LRR_typ_2 268 292 IPR003591 -
Amo12g2762 770 SMART LRR_typ_2 220 244 IPR003591 -
Amo12g2762 770 SMART LRR_typ_2 148 171 IPR003591 -
Amo12g2762 770 SMART LRR_typ_2 316 340 IPR003591 -
Amo12g2762 770 SUPERFAMILY L domain-like 38 367 - -
Amo12g2762 770 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 41 253 - -
Amo12g2762 770 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 231 741 - -
Amo12g2762 770 ProSitePatterns Protein kinases ATP-binding region signature. 461 483 IPR017441 GO:0005524
Amo12g2762 770 ProSiteProfiles Protein kinase domain profile. 455 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2762 Amo-Chr12 113414190 113416935 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2762 75 627 Receptor kinase-like Gene Family AT4G08850 38.824 5.82e-114 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2762 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2762 - - ahf:112730549 1422.14