Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2760 ATGGCAAACTCAGGTTGCAGTTCATTAGCATTATTGAGGCTTATGTTTGTTGAAACTTTGTTTCCATTAGTCCTCCTAACTGTTATGAGTGCCAACATAATGGTGGCAGCATCAAATTCCTCGTCCTTGAACGAGGAACAAAAGGCCCTGCTTCATAGCAGCTGGACGGAAGGTCGCAACATCTCAAAACATTGCGATTGGACTGGGATTGTGTGCAATGAAGCTGGTAGTGTCACTGACATTTCAACAAGGCGTTATTTTTTTATTCCTTCATCTGAATTGAGGAACTTCAATTTTACTGCATTCCCCAATTTAATTCGTCTCGAACTTAGTGGTTTGGGACTCAAGGGTATCATTCCAACTGAAATAAGCTCTCTTACAAAGCTTATGTATCTTGATCTCTCCTCTAACTATCTTGAAGGTGAGTTGCCTGCTTCACTTTCAAGGCTCACTCAACTTAGGATTTTTAATGTTTCAAACAATTTTCTTAGTGGTATGATCCCTTCCTCTTTTAATCACTTTAAGTATTTGTTTCATCTCTCCCTTGACTCGAACAACTTTAAAGGCCCCATTCCTGTAGAATTGAAGAATTTAAAAGGTTTGAAGCAGTTAACTCTTTCAAATAATTCATTCAATGGTTCAATACCACCCACTCTGGGACAACTGGAGAACTTGAAATGTCTCTCCTTTGGTTCAAACCATATAGAAGGTCCCATCCCTATTGAACTAGGGCACTTGATCCATCTGGAAGTTTTAGACCTCTCTGACAACAAGATTTCTGGTGTCATACCATATGAGATTGGACAACTCTCTAGGCTTTCAACTTTAGATATTTCCAACAATAACCTTGAGGGACCAATTCCATTTGATATTCTAAACCATTGCAGAGTTGTGCAACTAAGTAACAACTCTTTATGTGGTGGCATTCCTTCTCAAATTGGCAATCTTTTTTCTCTAGACCTCAGTTATAATAACCTCTCTGGAAAGATACCCAAGGGACTCCATTCTGTACCTTACCTCAATATGTCTTACAATTCCTTTGTTGTGGATCACAACTATTGTGGCTTTCCAAAAGACTCATTGATCGGTAATAAGATACCAGGTCCCCCTTGCCCTTCTACTCATGATTATAATTATCTTCCTTTACCTGTACTAATCTTAGGGTCAATCATTAATGGCACATGGATTTCACTCGTTTTTGTATGTTGGGGAATTCATGTTTTTTGTCCATACGAGGTCAAATACGAGGAAAGAAGAAGGAATGGAGATATCTTCTCAATTTGGAACTATGATGGTAAAATTGCATTTGAAGACATAATCAAAGCAACAGAAGACTTTGGTATGAGGTATTGCATTGGAACAGGTGCTTATGGAAGTGTCTACAAAGCAAAACTTCCTAGTGGCAAAAGTGTGGCACTAAAGAAACTTCACAGAACAGAATCTGAAAACCCATTATTTTACGAGTGTTTCAAAAACGAGGTCAAGATCTTAAGTGAAATACGCCACCGGAACATCATTAGGCTTTACGGTTATTGTTTGCACAATAAGTGCATGTTTTTGATATATGAGTATATGGAAAAAGGAAGCCTGTTCTATAACCTAGCCATTGATGAAGAAGCTCAAGAGTTGAATTGGAACAAAAGAGTAAACATCATCAAAGGGACTGCATTTGCTCTCACTCATATGCACCATCACTGTTCCCCAGCCATTGTCCATCGAGATGTAACTAGTTCCAATGTTTTGTTGAGTTCAAATTTAGAGGCTTGTCTATCAGATTTTGGTACAGCTAAACTCCTTAATCCTGATTCATCTAATCAAACTCTACTAGTTGGCACTTGTGGATATGTTGCACCAGAGTTGGCTTATAGCATCAATGTGACAACAAAATGTGATGTTTATAGCTTCGGAGTAGTGACGTTGGAAACAATAATGGGGGAACATCCTAAGGAACTGCTTTCCAATATGTCAAAACCATCTGCTCCTAAGATCATGCTCAAAGATATATTGGATTCACGTATCCCATTGCCCTTTCTTCGAAAAGACATGCGGGATATTGTACTTGTTGTAACATTAGCACTAGCATGCTTGCATCCCAACCCAAAATCAAGACCTTCAATGCAGGACATAGCTAAAGAGCTTTTGTTTTCAAAGTCGCCATTGCTTTGGCATTTTGATGGTATTTCAATTCACCAACTTGTGAATCAGGAAATGTATGCAATAGGTAAAAATTAG 2232 0.3849 MANSGCSSLALLRLMFVETLFPLVLLTVMSANIMVAASNSSSLNEEQKALLHSSWTEGRNISKHCDWTGIVCNEAGSVTDISTRRYFFIPSSELRNFNFTAFPNLIRLELSGLGLKGIIPTEISSLTKLMYLDLSSNYLEGELPASLSRLTQLRIFNVSNNFLSGMIPSSFNHFKYLFHLSLDSNNFKGPIPVELKNLKGLKQLTLSNNSFNGSIPPTLGQLENLKCLSFGSNHIEGPIPIELGHLIHLEVLDLSDNKISGVIPYEIGQLSRLSTLDISNNNLEGPIPFDILNHCRVVQLSNNSLCGGIPSQIGNLFSLDLSYNNLSGKIPKGLHSVPYLNMSYNSFVVDHNYCGFPKDSLIGNKIPGPPCPSTHDYNYLPLPVLILGSIINGTWISLVFVCWGIHVFCPYEVKYEERRRNGDIFSIWNYDGKIAFEDIIKATEDFGMRYCIGTGAYGSVYKAKLPSGKSVALKKLHRTESENPLFYECFKNEVKILSEIRHRNIIRLYGYCLHNKCMFLIYEYMEKGSLFYNLAIDEEAQELNWNKRVNIIKGTAFALTHMHHHCSPAIVHRDVTSSNVLLSSNLEACLSDFGTAKLLNPDSSNQTLLVGTCGYVAPELAYSINVTTKCDVYSFGVVTLETIMGEHPKELLSNMSKPSAPKIMLKDILDSRIPLPFLRKDMRDIVLVVTLALACLHPNPKSRPSMQDIAKELLFSKSPLLWHFDGISIHQLVNQEMYAIGKN* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2760 743 ProSiteProfiles Leucine-rich repeat profile. 248 269 IPR001611 GO:0005515
Amo12g2760 743 Gene3D Ribonuclease Inhibitor 292 365 IPR032675 -
Amo12g2760 743 Gene3D Phosphorylase Kinase; domain 1 412 524 - -
Amo12g2760 743 PRINTS Leucine-rich repeat signature 249 262 - -
Amo12g2760 743 PRINTS Leucine-rich repeat signature 270 283 - -
Amo12g2760 743 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 39 255 - -
Amo12g2760 743 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 221 732 - -
Amo12g2760 743 ProSitePatterns Tyrosine protein kinases specific active-site signature. 570 582 IPR008266 GO:0004672|GO:0006468
Amo12g2760 743 Pfam Protein kinase domain 452 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2760 743 Gene3D Ribonuclease Inhibitor 36 191 IPR032675 -
Amo12g2760 743 Gene3D Ribonuclease Inhibitor 192 291 IPR032675 -
Amo12g2760 743 SUPERFAMILY L domain-like 81 347 - -
Amo12g2760 743 ProSitePatterns Protein kinases ATP-binding region signature. 452 474 IPR017441 GO:0005524
Amo12g2760 743 Pfam Leucine rich repeat 224 283 IPR001611 GO:0005515
Amo12g2760 743 Pfam Leucine rich repeat 152 210 IPR001611 GO:0005515
Amo12g2760 743 ProSiteProfiles Protein kinase domain profile. 446 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2760 743 SUPERFAMILY Protein kinase-like (PK-like) 428 716 IPR011009 -
Amo12g2760 743 Pfam Leucine Rich Repeat 128 150 IPR001611 GO:0005515
Amo12g2760 743 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 39 255 - -
Amo12g2760 743 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 221 732 - -
Amo12g2760 743 SMART LRR_typ_2 198 222 IPR003591 -
Amo12g2760 743 SMART LRR_typ_2 126 149 IPR003591 -
Amo12g2760 743 SMART LRR_typ_2 246 269 IPR003591 -
Amo12g2760 743 SMART LRR_typ_2 150 173 IPR003591 -
Amo12g2760 743 SMART LRR_typ_2 270 294 IPR003591 -
Amo12g2760 743 Gene3D Transferase(Phosphotransferase) domain 1 525 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2760 Amo-Chr12 113400689 113403065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2760 105 618 Receptor kinase-like Gene Family AT4G08850 39.439 3.82e-106 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2760 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2760 - - adu:107475713 1142.1