Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2759 ATGCTTTCAATTAGTAAAGAGTTGTGGAGTAACCAACATAAGAATGTCTCAAACCGTTGCAACTGGCCCGGAGTCAACTGCAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAACTCCAAGTAATTTCACCCTCGAGTTCATGACACAACTCTGCTTTTTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATGGGGTTATGTGAGTTCCCTAAACTAAGTGGTCTCAAGAAGCTACAACATCTCAACCTATCATACAACTATTTAGGAGGTGAGCTTCCTTTTACATTATTGGAAAATCTAACTCAACTTCTTGTGTTGGACATTTCTAACAATTATATTATTAGTGGTACAATTCCACAAGAACTAATCAAACTGGAGAGACTTGTCACGTTGGACTTGAGTGCCAACGCGTTCAGCGAAGGCATTCCATTGATCTTGGGTCAAATGAACAGCCTCACACACATGAAACTTTCCAATAATCTCCTGTATGGGGATCTTCCTTTCACACTGGCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTTCTTGTCTGGTCCAATTCCTGAGCAAATCGGGTACTTGACCCGTTTGGAAGTGCTCACCATCGGATCCAACAGGATAGATGGTTGTATCCCCAAAGAAATAGAGCTTTTGTTGCATCTAGAAGGTTTAAATCTTTCTTATAATGCTATTTCTGGTGTTATCCCATCTTCTATCTTTATTCACTCTAGTTATGTGGATCTCAGCCATAACAATTTAAGTGGAAGCATTCCTTCTCAATTTGGAAACCTTTCATATTTAGACGTTCGTTACAATAATCTTTGTATCAAAAATAGAAAGGAACTTGAGTTTGTTATTCCATTCTGTTATCTGGATTACAATTCCTTTCTTGACAACGAATATTATGACTGCGATGGTCATTTAAACGACCATCATAATAAGCATTTTCGCCGATCACTGGTTTTGGTCATAATCGTGGTCTGCGTTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCGTGCCAGGCATCATGGCAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCCATTTGGAACTATGATGGCAAAATTGCATTTGAGGACATCATTCAAGCCACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTATTGTTTGCATAACAGATGCATGTTTTTGGTGTACGAATACTTGGAAAGAGGAAGCTTGTTCTGTAACTTGGCCAACGAGATGGAAGCACAAGAGTTGAAGTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGTCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAATAATGTTCTGCTGAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTCGGCACAGCAAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTCTAGTTGGCACTTATGGATATATTGCTCCAGAACTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAATGATGGGTCATCACCCAGGAGAATTCATGTCCACTATGTCAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCGCGGATTCCACTTCCGAAATCTCGGAAAGATATGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGCTTTCAGCTTCCAAGGCTTCAATGAATTCTTCTTTTTTTGATGTCTCAATCTACCAATTGATGCATTAG 2124 0.3988 MLSISKELWSNQHKNVSNRCNWPGVNCNKAGSITLLSPPTPSNFTLEFMTQLCFLKLNFSVFQNLVHLDLSEMGLCEFPKLSGLKKLQHLNLSYNYLGGELPFTLLENLTQLLVLDISNNYIISGTIPQELIKLERLVTLDLSANAFSEGIPLILGQMNSLTHMKLSNNLLYGDLPFTLANLTQLLVLDLSQNKLSGFIPHEIGKLTNLLTLDLSSNFLSGPIPEQIGYLTRLEVLTIGSNRIDGCIPKEIELLLHLEGLNLSYNAISGVIPSSIFIHSSYVDLSHNNLSGSIPSQFGNLSYLDVRYNNLCIKNRKELEFVIPFCYLDYNSFLDNEYYDCDGHLNDHHNKHFRRSLVLVIIVVCVTISLGSVGIGICIFRARHHGKLENKATKNGDLFSIWNYDGKIAFEDIIQATEDFDIRYCIGTGAYGSVYEARLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHRNIIRLYGYCLHNRCMFLVYEYLERGSLFCNLANEMEAQELKWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFMSTMSKPSTQQLLVKDVLDPRIPLPKSRKDMQDVVHVVKLALACLSSDPKSRPSMQDVANELSASKASMNSSFFDVSIYQLMH* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2759 707 Gene3D Ribonuclease Inhibitor 279 321 IPR032675 -
Amo12g2759 707 Gene3D Phosphorylase Kinase; domain 1 381 497 - -
Amo12g2759 707 Gene3D Ribonuclease Inhibitor 2 278 IPR032675 -
Amo12g2759 707 Pfam Leucine Rich Repeat 86 103 IPR001611 GO:0005515
Amo12g2759 707 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 5 225 - -
Amo12g2759 707 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 197 705 - -
Amo12g2759 707 Pfam Leucine rich repeat 160 217 IPR001611 GO:0005515
Amo12g2759 707 PRINTS Leucine-rich repeat signature 206 219 - -
Amo12g2759 707 PRINTS Leucine-rich repeat signature 185 198 - -
Amo12g2759 707 ProSiteProfiles Protein kinase domain profile. 419 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2759 707 SUPERFAMILY L domain-like 14 316 - -
Amo12g2759 707 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 225 - -
Amo12g2759 707 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 197 705 - -
Amo12g2759 707 ProSitePatterns Protein kinases ATP-binding region signature. 425 447 IPR017441 GO:0005524
Amo12g2759 707 SUPERFAMILY Protein kinase-like (PK-like) 400 686 IPR011009 -
Amo12g2759 707 Gene3D Transferase(Phosphotransferase) domain 1 498 701 - -
Amo12g2759 707 SMART LRR_typ_2 109 134 IPR003591 -
Amo12g2759 707 SMART LRR_typ_2 84 108 IPR003591 -
Amo12g2759 707 SMART LRR_typ_2 254 278 IPR003591 -
Amo12g2759 707 SMART LRR_typ_2 182 205 IPR003591 -
Amo12g2759 707 SMART LRR_typ_2 206 230 IPR003591 -
Amo12g2759 707 ProSitePatterns Tyrosine protein kinases specific active-site signature. 543 555 IPR008266 GO:0004672|GO:0006468
Amo12g2759 707 Pfam Protein kinase domain 424 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2759 Amo-Chr12 113391833 113394091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2759 115 591 Receptor kinase-like Gene Family AT4G08850 41.498 1.51e-106 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2759 Pkinase 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2759 - - ahf:112730549 1120.92