Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2757 ATGAATATGTGTTTATCAACAAGATTGTTGAAGAAGTCTCCAATAATCTCAAACGAGTTCCTCTACACATTGCAGATTACCCTGTTGGGCTGCAACCTCGGGTTCAAAGAAGTGACTAAACTTCTACGCATTGGGGTTGATGATGACAAGGTCAAGATGGTTGGCATTCATGGGATTGGTGGAATAGGCAAAACAACAATTGCTTGTGCTTTATATAACTCCATTGCTGATCGGTTTGAAGCRTCSTGCTTCCTGTCTAATGTTAGAGAAAAAGCAAGCAAGAATGGTTTGGTATCACTSCAAGAGTCACTACTTCTTGAATTGGTTGGGGAGGATGTTAAGTTGGGAGGTGTGAATCATGGAATTCCAATTATAAAAAGGAGGCTCAACCAAAAGAAAGTGTTGCTGGTTCTTGATGATGTTGACAACTTGCAGCAGTTACGAGCTATAGCCGGAGGGACTGATTGGTTTGGTTCTGGTAGCAGAGTCATCATAACAACAAGGGATAAACATTTGCTACGTTCACATATAGATGTGAAAGTAAAATCATATGGGGTCAAGGAGTTAAATAAYGWAGAAGCTCTTGAACTGTTAAGTTGGAATGCTTTTAAAGGAAACAAAGTTGATCCAAGTTATGCAGKCCTTTTGAATCGTGCTATACGCTATGCAAATGGGCTTCCATTGGCATTGACAATAATCGGTTCAAACTTGTTAGGGAAAAGCCTAGATGAATGGGAATCGGCATTGSAAAATTATGAYCAAAGGCCAAACAGAAGTATTCAGGAAATGCTTACTGTCAGCTATGAAGGTTTGGAGGATATCCAGAAGGAAATTTTCCTTGACATTGCTTGTTTCTTTGTTGGTGAGAAGTTGGAATATGTGAACAACATGTTAATGCACGGCCGCGGCTTCAACCCCGAGTATGGTATAGGAGTTTTGATTCAGAAATCTCTCTTAATGGACAAACATGGTCATGCAGCAATGCATGACTTGGTAACAGAAATGGGGAGAGAAATTGTGAGGAAAGAATCAGAGGTAGAGCCTGGCAACCGCAGTAGGCTATGGTTCTATGATGACATTATTCATGTTTTAGAAGAAGACATGGGATCTGAGAAAACAGAAATCATGATCATAGATTTGCCTGAAGATGAAGAAGTGTATTGGACAGGAGAAGAATTTAAGAAGATGAAAAACCTCAAAATACTTAAAGTCACAAATGCAAAGTTCTCCACAGGTCCCAAGCATCTCCCAAATACCTTAAGAGTGCTCGATTGGGAAGGATATCCATCACCATGCTTACCACCGGATTTTCGTCCACGGAAACTCAGCATGATGAACTTGCCTAACAGTTCCCTCAAGTTGGATAATCCCCTGAAGAACTTTAGGAGTTTGAGTCACATGAATTTTGAAGGTTGTGAAACATTAGTACAACTACCTGACATATCTGGAGTCCCAAATTTGACAGAACTTTGCCTTGATGATTGCACAAYTTTGGTTGAAGTCCATGATTCAATTGGATTTCTTCATAAACTCAGGAAGTTGAGTGTTAAAGGATGCACTAGCCTCAGCACATTTCCTCATAGCATCAACTTGACATCTCTTGAAACTCTCTCTTTGTGGGGCTGCTCAAGCCTTAGAAACTTTCCAGAAATTTTAGGAAAGATGGAGTTTCTAGAAGATGTTGATTTGGGATCAAGTGCGATTGAAGCGCTTCCTCATTCAATTCAAAATCTAGTAGGCCTTCGACGGCTCGACTTGATCAGTTGCAACTGGCTTAGTCAATTGCCAAGTAGCATTTTCTTGTTGCCGAAACTCGAGTCATTGGAAGCTGAATACTGTAAAGGGTGTCAAATATTAATCAATTATGAAGGACAAGAAAATATGGGCAGCATAGTCTCTTCAAAAGTGAAGGATCTTCACTTTAGATCTTGCAATGTATCCGATGAARTTCTTCCTATTTATTTCACTTGCTTTCCCAACATAGAAATGTTACATTTGGGCGCAAATAACTTCACAACCCTTCCTTCCTGCATCAAAGACTGTCGCTTTTTAACGAGCGTCTACTTGGACGATTGCAAGCAACTTCAACACATCACAGCACTTCCACCAAACATCAAAACTTTATCAGCAAGGAATTGCATATCCTTGACTTCACACTCTACAAGCATGTTATTGAGTCAGGAAATACATGAAGTTGGGGGGACACACTTTATGTTTCCAGGAACAAATATTCCAGGTTGGTTTGACCAACACAAGGAGGGAGCCTCACTGTCTTTCTGGTTTCGAAAGAAATTCCCGGAAATCGCACTTTGTTTTGTTTTCGGAGGCTTGGACAAGGAACCTAGGAAATTTGAGGTCAAGTTCCATGTGTTCATCAATGGCAAGCCATCATTCCAGGGCAACAGCTTCAAAATGCTGACGGATCACGTGTTCCTATTCGATCTGCAGAAGGAAGTGGAGCTTCCTTCTTACCAACTTGACCAAGTAGTTCTTGAAAATGAATGGAATCATGTTGAGATTCATTGTTTGCCTAGTCCAACAGTGTTAGAATCATCCCTTGATATGGCCATTGTGAAATGGAGTGGTGTTCATGTGTACAAGCAGGGAAATAACATGGATGATGTTTCATTTTGTAATCCTCAACACAGAACATATGATTTGGTAGCTCGCTATCCGTGGATCAAGAACCAGTTTGTTCTCACAAATGAGACCTCAGATTCCAATGCAATGGTGATGAGAACCATTGGCATGACTAGTGAAAATGGTAAGAGTCTTGAGGGAGAGGATGGAAATGGAAGTTGA 2802 0.4044 MNMCLSTRLLKKSPIISNEFLYTLQITLLGCNLGFKEVTKLLRIGVDDDKVKMVGIHGIGGIGKTTIACALYNSIADRFEASCFLSNVREKASKNGLVSLQESLLLELVGEDVKLGGVNHGIPIIKRRLNQKKVLLVLDDVDNLQQLRAIAGGTDWFGSGSRVIITTRDKHLLRSHIDVKVKSYGVKELNNXEALELLSWNAFKGNKVDPSYAXLLNRAIRYANGLPLALTIIGSNLLGKSLDEWESALXNYDQRPNRSIQEMLTVSYEGLEDIQKEIFLDIACFFVGEKLEYVNNMLMHGRGFNPEYGIGVLIQKSLLMDKHGHAAMHDLVTEMGREIVRKESEVEPGNRSRLWFYDDIIHVLEEDMGSEKTEIMIIDLPEDEEVYWTGEEFKKMKNLKILKVTNAKFSTGPKHLPNTLRVLDWEGYPSPCLPPDFRPRKLSMMNLPNSSLKLDNPLKNFRSLSHMNFEGCETLVQLPDISGVPNLTELCLDDCTXLVEVHDSIGFLHKLRKLSVKGCTSLSTFPHSINLTSLETLSLWGCSSLRNFPEILGKMEFLEDVDLGSSAIEALPHSIQNLVGLRRLDLISCNWLSQLPSSIFLLPKLESLEAEYCKGCQILINYEGQENMGSIVSSKVKDLHFRSCNVSDEXLPIYFTCFPNIEMLHLGANNFTTLPSCIKDCRFLTSVYLDDCKQLQHITALPPNIKTLSARNCISLTSHSTSMLLSQEIHEVGGTHFMFPGTNIPGWFDQHKEGASLSFWFRKKFPEIALCFVFGGLDKEPRKFEVKFHVFINGKPSFQGNSFKMLTDHVFLFDLQKEVELPSYQLDQVVLENEWNHVEIHCLPSPTVLESSLDMAIVKWSGVHVYKQGNNMDDVSFCNPQHRTYDLVARYPWIKNQFVLTNETSDSNAMVMRTIGMTSENGKSLEGEDGNGS* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2757 933 Gene3D - 27 180 IPR027417 -
Amo12g2757 933 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 841 IPR044974 GO:0006952
Amo12g2757 933 Gene3D - 188 272 IPR042197 -
Amo12g2757 933 Gene3D Ribonuclease Inhibitor 546 731 IPR032675 -
Amo12g2757 933 PRINTS Disease resistance protein signature 53 68 - -
Amo12g2757 933 PRINTS Disease resistance protein signature 223 237 - -
Amo12g2757 933 PRINTS Disease resistance protein signature 128 142 - -
Amo12g2757 933 PRINTS Disease resistance protein signature 529 545 - -
Amo12g2757 933 SUPERFAMILY "Winged helix" DNA-binding domain 259 365 IPR036390 -
Amo12g2757 933 SUPERFAMILY L domain-like 373 734 - -
Amo12g2757 933 PANTHER ARCHAEAL ATPASE 32 841 - -
Amo12g2757 933 Pfam NB-ARC domain 47 269 IPR002182 GO:0043531
Amo12g2757 933 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 282 IPR027417 -
Amo12g2757 933 Gene3D Ribonuclease Inhibitor 376 545 IPR032675 -
Amo12g2757 933 SMART AAA_5 50 183 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2757 Amo-Chr12 113360365 113364607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2757 25 613 WRKY Transcription Factor Family AT4G12020 32.953 3.69e-74 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2757 - - ahf:112730546 1728.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2757 12 113360365 113364607 Amo12g2757 12 113360365 113364607 ECH