Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2756 CTATTCTCTGCCTTTTTCTTGTTAGTTTTCTTCAATTCTCTTTGTGGAACCATTCCTTCTGAGTTGGGTGAATTCGAGAATCTAACCTTTCTTTCGCTTGCTTCAAACCGAATCGAAGGTCCAATACCACAACAGTTAAGGAATTTAAGAGACCTACAAGAACTACATCTCTCAAATAATTTGATCAATGGTACAATCCCGTCTAGTCACATGCTTCAAAATCTTGGGAATTTAAAGAGTTTAAAAAAACTCTATTTCTCAAATAATTCACTCTCAGGTTCAATCCCTTTAACTCTATATCAATTGGGAAATTTATCTTATTTCTACCTTGATTCAAACCAAATAGAAGGACAAACACCACCAGAGATAGGGAGTTTAGAAGCACTAGCAGTATTAAATCTTTCATCTAACTCTTTTTTTTGTCCAATTCCTTCTCAATTCTATACGAATTTGGTTAGCGGAACTACCTTGTATCTTTCTCACAAGAAGATATCTAGTGTTATTCTATCTGAACTGTTCAAGTTACCCTTGTCTTCTCTGCATCTTTCAACCAATCAATTAGTTGGGCATATACCATTTGAGATGAGGAATTCCATTAGCCTTTGTTATGTAGACCTTTCCAATAATAAGCTAGAAGGATTTATCCCATCTCCTAGAGTAAACTGTTTCCTAGCAAGATCACAAACAGATATAGGTCGTATATTAGCAAGTTTGGATCTTAGCTACAACCATCTCTCAGGTGGCTTACCAATTGAACTTGCAAATTTACTTCATATAAACGCTTCAAAGTTTTCCATAGAATCACTAATTGGTAACACTCCTAATTTCCCTTCTTGTTCTTCTCAAGTCCAAAAAACTAACAAGGCTAAACACTTCATTGTAATTATTCTTCCTGTTAGTTGCATCCTCCTTATCATTTGTCTGTTCATATTGTATTTTACTCTGTCTACCAATAAAATCAAAATTGAACAAAGACAAGCCAAAAATGGAGACTTGTTTTGTATATGGAACTATGATGCAACAAATAACTTTGACTTCCAGTACTGTATTGGTACTGGGGCATATGGTAGTATTTATAGAGCACAATTACCAAGTGGAAAAGTTGTTGCATTGAAGAAACTTCAACAAAGCGAATCTCAAAACATATCCTTCAATGAAAGCTTCCGCAACGAAGTGAAGATGTTAACAGAAATCCGTCATAGAAAAATCGTGAAACTTCATGGCTTTTGCCTTCACAATCAATGCAAGTTTTTGGTTTATGAATACATGGAAAGAGGCAGCTTATTTCATGTCTTGAACAATATTAAGGAAGTTGGGGAGTTGAATTGGAGAAAGAGGGTGAATATCATTAAGGCAATGGCGAATGCATTGTCTTACATGCACCATGATTGGTCTACTCCATTTCCTATCAGCACTTGTTTTTCTCCTGTAACACTAGATTCAAGTTACAACTTGTTGAATGGAAGCATAATTTCTTAA 1479 0.3509 LFSAFFLLVFFNSLCGTIPSELGEFENLTFLSLASNRIEGPIPQQLRNLRDLQELHLSNNLINGTIPSSHMLQNLGNLKSLKKLYFSNNSLSGSIPLTLYQLGNLSYFYLDSNQIEGQTPPEIGSLEALAVLNLSSNSFFCPIPSQFYTNLVSGTTLYLSHKKISSVILSELFKLPLSSLHLSTNQLVGHIPFEMRNSISLCYVDLSNNKLEGFIPSPRVNCFLARSQTDIGRILASLDLSYNHLSGGLPIELANLLHINASKFSIESLIGNTPNFPSCSSQVQKTNKAKHFIVIILPVSCILLIICLFILYFTLSTNKIKIEQRQAKNGDLFCIWNYDATNNFDFQYCIGTGAYGSIYRAQLPSGKVVALKKLQQSESQNISFNESFRNEVKMLTEIRHRKIVKLHGFCLHNQCKFLVYEYMERGSLFHVLNNIKEVGELNWRKRVNIIKAMANALSYMHHDWSTPFPISTCFSPVTLDSSYNLLNGSIIS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2756 492 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Amo12g2756 492 SUPERFAMILY L domain-like 6 259 - -
Amo12g2756 492 Gene3D Ribonuclease Inhibitor 3 291 IPR032675 -
Amo12g2756 492 Pfam Protein kinase domain 349 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2756 492 ProSiteProfiles Protein kinase domain profile. 344 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2756 492 Gene3D Transferase(Phosphotransferase) domain 1 333 485 - -
Amo12g2756 492 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 274 - -
Amo12g2756 492 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 75 468 - -
Amo12g2756 492 PANTHER OS01G0515300 PROTEIN 12 274 - -
Amo12g2756 492 PANTHER OS01G0515300 PROTEIN 75 468 - -
Amo12g2756 492 SUPERFAMILY Protein kinase-like (PK-like) 336 464 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2756 Amo-Chr12 113308756 113322208 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2756 12 465 Receptor kinase-like Gene Family AT4G08850 35.491 2.38e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2756 Pkinase 3.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2756 - - ahf:112752745 435.647