Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2751 ATGAAGCCGTGTTTGTGCGTGCATKSGGTGCTTTTGTTTTCTACCACMKGCTCTTATAGGATATTYCCACCAAATGCACCCAACCTCACCACCGTGGAGCCGCCTTCWTCTTCCTTCAATAATTCGGAAAGACAGGCATTGATTCAGAGTGGYTGGTGGGGTAGTCATCACGCCASTGACCCAAACCATTGCTATTGGCWGGGCGTCAGCTGCGACGATGCTGGAAGTGTTGTAGGGATTTACGGATGGGAATTGAATTACRAATCCAAATTATTGCRGCTACAGRCCTTGAACTTCACGGCCTTCCCCAATTTGGSTTCTMTGRRTCTTGATGGAATGGGRCTTAYCGGAAGCATCCCCAAAGAAATTGGTACYWTYACAAARCTTTCTSATCTTGTTTTGTCGAATAATAGTCTTYATGGTAARCTGCCTCCAACACTTTCAAATCTCACTCAACTTTTGTCCCTTTATGTTTCTTTCAATTCTCTTAGTGGCAGCATTCCTTCTACTTTTGGTCTATTGGAGAATTTGATATTTCTCAAATTAGATTCAAATCAAATTGAAGTTAAATTTGAACAAAGTTCAAAAAAGGATGGAGACTTGTTTTCCATATGGAACTATGATGGGAAAATTGCATTTGAAGACATCATCGAAGCAACACAGGATTTTGATATCAGAYACTGCATAGGAACTGGYGCTTATGGCAGTGTGTACAAAGCCCAACTTCCAAGTGGCAAAATTGTTGCATTGAAGAAACTTCACCAAAGAGAGTCACAAAATCCATCTTTTGACAAGAGCTTCCGCAACGAGATTAAGATGTTATCACAAATTCGTCATAGAAACATTGTCAAGCTTCATGGATTTTGTCTCCACAATCGRTGCATGTTTTTGGTSTACGAATACATGGAACGAGGAAGCTTATTTTATGCCTTAAGCATGGATGATGATGAGGCTAAGGAGCTAAGTTGGAGCAAAAGGGTGAATATCATTAGTGGAACAGCTAATGCTTTGGCSTACATGCATCATGACTGTTTCCCACCGATAGTTCATAGAGATGTAACAAGCAACAACATTTTGTTGAACTCAGAGTTGCATGCTGTTGTCTCGGACTTYGGAACYGCTAGACTTCTTGATCCTGATTCTTCAAATCAAACATTACAAGTTGGAACRTATGGATACCTTGYACCAGGTGATGTTTTCTTGTAA 1206 0.3947 MKPCLCVHXVLLFSTTXSYRIFPPNAPNLTTVEPPSSSFNNSERQALIQSGWWGSHHAXDPNHCYWXGVSCDDAGSVVGIYGWELNYXSKLLXLQXLNFTAFPNLXSXXLDGMGLXGSIPKEIGTXTKLSXLVLSNNSLXGKLPPTLSNLTQLLSLYVSFNSLSGSIPSTFGLLENLIFLKLDSNQIEVKFEQSSKKDGDLFSIWNYDGKIAFEDIIEATQDFDIRXCIGTGAYGSVYKAQLPSGKIVALKKLHQRESQNPSFDKSFRNEIKMLSQIRHRNIVKLHGFCLHNRCMFLVYEYMERGSLFYALSMDDDEAKELSWSKRVNIISGTANALAYMHHDCFPPIVHRDVTSNNILLNSELHAVVSDFGTARLLDPDSSNQTLQVGTYGYLXPGDVFL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2751 401 Gene3D Ribonuclease Inhibitor 36 199 IPR032675 -
Amo12g2751 401 ProSiteProfiles Protein kinase domain profile. 223 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2751 401 Gene3D Phosphorylase Kinase; domain 1 200 301 - -
Amo12g2751 401 SUPERFAMILY L domain-like 47 188 - -
Amo12g2751 401 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 191 396 - -
Amo12g2751 401 ProSitePatterns Tyrosine protein kinases specific active-site signature. 348 360 IPR008266 GO:0004672|GO:0006468
Amo12g2751 401 ProSitePatterns Protein kinases ATP-binding region signature. 229 251 IPR017441 GO:0005524
Amo12g2751 401 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 191 396 - -
Amo12g2751 401 SUPERFAMILY Protein kinase-like (PK-like) 203 396 IPR011009 -
Amo12g2751 401 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 46 187 - -
Amo12g2751 401 Gene3D Transferase(Phosphotransferase) domain 1 302 397 - -
Amo12g2751 401 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 46 187 - -
Amo12g2751 401 Pfam Protein kinase domain 227 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2751 Amo-Chr12 113189436 113191760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2751 115 400 Receptor kinase-like Gene Family AT4G08850 40.751 2.51e-73 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2751 Pkinase 3.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2751 - - ahf:112752745 401.364