Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2745 ATGGAAGCTTATGTGGCAATATTAGCAAAGATAACTTATCTTGTTGCCCTGCTTTTTCTGGTAATAGGGTTGTGCACCCCAATTGTTGTTGAGGCCAAACATGTGAGCATCAAGAACAGGCTGGGATCTGGGAAGAACATGACCCTGCATTGTAAATCCAAAGATACTGATCTGGGTGAGCATAGTATAGCATATGGGGATGAGTTTGGGTGGGACTTCCATGACGACGTTGTTGGAACCACACTCTTTTACTGTGATTTGGAGTGGGAGAGAGTTCAGGAGTACCATTTTGATGCCTATGACTTCCACAGGGACTTTGTCCGATGCGGTGGTGATGGATGTTCATGGCTGATATCTGCTGAAGGCATGTATGGTTCAAATAGTCAAACAGGGATCTGGGAATTCATGTACCATTGGCCAAACTGA 426 0.4484 MEAYVAILAKITYLVALLFLVIGLCTPIVVEAKHVSIKNRLGSGKNMTLHCKSKDTDLGEHSIAYGDEFGWDFHDDVVGTTLFYCDLEWERVQEYHFDAYDFHRDFVRCGGDGCSWLISAEGMYGSNSQTGIWEFMYHWPN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2745 141 Pfam Plant self-incompatibility protein S1 34 139 IPR010264 -
Amo12g2745 141 PANTHER PUMILIO HOMOLOG 15-LIKE 25 124 - -
Amo12g2745 141 PANTHER - 25 124 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2745 Amo-Chr12 113120138 113121521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2745 35 139 Carbohydrate Esterase AT3G16970 34.259 7.63e-13 60.1