Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2743 ATGGTGGCAAAGTATAGTAACTTTGCTTTGCTTGTTACAGCAGTGGTGCTTGTGTTTTCTACCACAACCTCTTATAGGATATTCCCACCAAATGCACCCAACCTCACCACCGCGGCGGCGGCTTCGTCTTTCTTCAATAATTCGGAGAGACAGGCTTTAATACAGAGTGGCTGGTGGAGTCATGACCATAGTGACTTAAACCATTGCAAATGGACTGGCATCAGCTGTGACCGTGCTGGAAGAAGTGTTGAAGAGATTCATGGATGGGAATTGATTATTATTTCCGAATCATTGTGGCTACAGAACTTGAATCTCACTGCCTTTCCCAACTTGGTCCATCTGTATCTTGATGAAATGGGGCTAAAGGGAAGCATTCCCAAAGAAATTGGTACTCTCACAAAGCTTTGCAATCTCGATCTGTCCAATAATAATCTTGATGGTAAGCTGCCGCCAACACTTTCAAACCTCACTCAACTTGAGTACCTTGATGTTTCTTTTAATTTTCTTAGTGGCATCATTCCTTCTACTTTGGGCCACTGCAAGGAGTTGATTTCTTTTTCTCTTGCTTCAAACCAAATTGAAGGTCCTATACCACTAGAACTAGGAAATTTGACAAGGTTATATTATTTAGATCTCTCCAATAATCTGCTAACAGACTTAATTCCATCAACTTTTATTCAGTTGGTGAGTTTAAATGATCTCAACCTTGGATCAAATCAAATTGGAGGTTCTATACCAGTGCAGATAGGGAATCTAACAAGTTTATGTTCATTGGATCTTTCGAACAACTCCTTTTCTGGTTCAATCCCCTTTCAAATAGGAGCTTTAACTCAGTTGCAATATTTCCTCATGGAACTCAATCAAATTAATGGTTCTATTCCTTCACAATTTATAAATTTGCCTAGTCTAAAAGGTTTAGATCTTTCTCATAATAAGTTGTCTGGTCCACTACCACCAAATATTGCAAGCACAAGTGGTAGGACTATAGACCTTAGTCATAATTTTCTCACTGGTGATATCCCATCTATCTTTGGAGTGAATTCAATGATGGAGAGTTTGGATCTCAGTTATAATAATTTCACAGGTAAACTGCACAAAGAACTTGCTAATCTTATATCCATAAACCTTTCATACAATTCCCTTGACTTTTCTCAAGACATCATGAGCTCAAAGTCACAGTTACCTGATTATTGTTACTTTCAACCAGAGTCATTAATTGGTTGCAACACACCAAGCTTCGCATCCTGCCATTCTACCCCAAAAACCCAACTTCCACATAGTGCTAAAACTAAGCACCTGCTTGTAATAGTTCTTCCTATAACCTGCATCATTCTTCTCACAATTATAGCGATAATACTTTTGGCAAGACGCACCAAAAGTAAGAAACTCGAGAAAAGAACGGCAAAAAATGGAGACTTATTTTCTATATGGAACTATGATGGAAAAATTGCATTTGAAGATATCATTGAAGCAACACAGGACTTTGATATCAGATATTGCATAGGAACTGGTGCATATGGTAGTGTATATAGAGCACAACTTCCAAGTGGCAAAGTTGTTGCAGTGAAGAAACTTCACCAAAGGGAGTCACAGAATCCTTCTTTTGACAAGAGCTTTCGCAACGAGGTAAAGATGTTAACAGAAATCCGCCATAGAAACATTGTCAAGCTCCARGGATTTTGTCTTCATAGTCAGTGTATGTTTCTAYTTTATGAATACATGGAAAYYGGAAGCTTATTTTATGCCTTGAGAATTYATGATGAAGCTGAGGAGCTAACTTGGAGCCATAGGGTGAATATACTTAGTGGAGCTGCTAATGCSTTGTCTTACATGCATCATGATTGTTCCCCACCAATAGTTCACAGAGATGTAACAAGCAACAACATTTTGTTGAACTCAGAGTTGCATGCTGTTGTCTCTGACTTTGGCACCGCTAGAGTTCTTGATCCAGATTCTTCAAACCAAACCTTGAAAGTTGGAACATATGGATATCTTGCTCCAGAATTGGCATATACATTGAGTGTAACAGAAAAATGTGATGTATATAGTTTTGGAGTGGTGGCATTGGAAACAATAATGGGAAGACATCCAGGAGATCTTATCTTGTCTTTGTTCAACTCTTCTAACAAAAACATAATGGTAAAAGATCTCTTGGATTCACGCATCAGTTTACCATTATGTCAAAAGGATGCTCAAGCTATAGTTCAAGTGGTAACATTGGCATTGGCATGCTTGGGCTCTAATCCAAAATCAAGACCATCAATGCAGCAAGTGGCTCATGAGCTTTCTAATTTCAAACAATCATCACTGTCTTTGCCTTTGTCTGAAATCACAGTCCATCAGCTGATAGCTTAG 2355 0.3847 MVAKYSNFALLVTAVVLVFSTTTSYRIFPPNAPNLTTAAAASSFFNNSERQALIQSGWWSHDHSDLNHCKWTGISCDRAGRSVEEIHGWELIIISESLWLQNLNLTAFPNLVHLYLDEMGLKGSIPKEIGTLTKLCNLDLSNNNLDGKLPPTLSNLTQLEYLDVSFNFLSGIIPSTLGHCKELISFSLASNQIEGPIPLELGNLTRLYYLDLSNNLLTDLIPSTFIQLVSLNDLNLGSNQIGGSIPVQIGNLTSLCSLDLSNNSFSGSIPFQIGALTQLQYFLMELNQINGSIPSQFINLPSLKGLDLSHNKLSGPLPPNIASTSGRTIDLSHNFLTGDIPSIFGVNSMMESLDLSYNNFTGKLHKELANLISINLSYNSLDFSQDIMSSKSQLPDYCYFQPESLIGCNTPSFASCHSTPKTQLPHSAKTKHLLVIVLPITCIILLTIIAIILLARRTKSKKLEKRTAKNGDLFSIWNYDGKIAFEDIIEATQDFDIRYCIGTGAYGSVYRAQLPSGKVVAVKKLHQRESQNPSFDKSFRNEVKMLTEIRHRNIVKLQGFCLHSQCMFLXYEYMEXGSLFYALRIXDEAEELTWSHRVNILSGAANALSYMHHDCSPPIVHRDVTSNNILLNSELHAVVSDFGTARVLDPDSSNQTLKVGTYGYLAPELAYTLSVTEKCDVYSFGVVALETIMGRHPGDLILSLFNSSNKNIMVKDLLDSRISLPLCQKDAQAIVQVVTLALACLGSNPKSRPSMQQVAHELSNFKQSSLSLPLSEITVHQLIA* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2743 784 ProSiteProfiles Leucine-rich repeat profile. 206 227 IPR001611 GO:0005515
Amo12g2743 784 SUPERFAMILY RNI-like 288 389 - -
Amo12g2743 784 Gene3D Transferase(Phosphotransferase) domain 1 574 773 - -
Amo12g2743 784 Gene3D Ribonuclease Inhibitor 41 222 IPR032675 -
Amo12g2743 784 ProSitePatterns Tyrosine protein kinases specific active-site signature. 619 631 IPR008266 GO:0004672|GO:0006468
Amo12g2743 784 Gene3D Phosphorylase Kinase; domain 1 455 573 - -
Amo12g2743 784 ProSiteProfiles Protein kinase domain profile. 495 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2743 784 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 238 782 - -
Amo12g2743 784 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 51 270 - -
Amo12g2743 784 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Amo12g2743 784 SMART LRR_typ_2 228 251 IPR003591 -
Amo12g2743 784 SMART LRR_typ_2 300 324 IPR003591 -
Amo12g2743 784 SMART LRR_typ_2 252 276 IPR003591 -
Amo12g2743 784 SMART LRR_typ_2 368 391 IPR003591 -
Amo12g2743 784 SMART LRR_typ_2 156 179 IPR003591 -
Amo12g2743 784 SMART LRR_typ_2 204 227 IPR003591 -
Amo12g2743 784 SMART LRR_typ_2 132 155 IPR003591 -
Amo12g2743 784 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 238 782 - -
Amo12g2743 784 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 51 270 - -
Amo12g2743 784 Gene3D Ribonuclease Inhibitor 325 393 IPR032675 -
Amo12g2743 784 ProSitePatterns Protein kinases ATP-binding region signature. 501 524 IPR017441 GO:0005524
Amo12g2743 784 Gene3D Ribonuclease Inhibitor 223 324 IPR032675 -
Amo12g2743 784 PRINTS Leucine-rich repeat signature 207 220 - -
Amo12g2743 784 PRINTS Leucine-rich repeat signature 300 313 - -
Amo12g2743 784 SUPERFAMILY L domain-like 55 319 - -
Amo12g2743 784 Pfam Leucine Rich Repeat 158 180 IPR001611 GO:0005515
Amo12g2743 784 SUPERFAMILY Protein kinase-like (PK-like) 477 762 IPR011009 -
Amo12g2743 784 Pfam Protein kinase domain 500 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2743 Amo-Chr12 113075874 113078985 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2743 111 667 Receptor kinase-like Gene Family AT4G08850 38.000 5.60e-117 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2743 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2743 - - gmx:100789677 799.66