Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2738 ATGAACATTGATGACAATAAGAATTTAAAGGAGTCTATCGAATGTGATGAGCTGTGTTTTGGGTATGATAGTAGTTCTGATAAGGAGGAGGAAAATCTTATCAACAATGAGAATGAATTCAGTGAATCCATGGAGGTATCGAATTGTAGCTATAAAATTCAAGAAGTTGAAAAGAAGTTAAACGAATTAAGCTATGATGACATGTGGGGTATTGAGTTTGACACCGTTGATCAATGTTGTGATTTTTATAGAAATTATGCTAAAGTGCACGGTTTTGTTGCGAGACTTGACGAAAAAGGACAAGATTTTAATGGAAACCTTAATATGCGACAGATGGTTTGTAACAGAGAGGGTACACGTAGAAAAAAGTACTTGGAGATGGAGAACAGAAAAAAGGATCACAAGCCAATCACACGTGTAATGTGTCAAGCAAATATTAGATTTCACTATGACTTGATTTTACAAAAGTGGCGGGTCACCAAATTTGAAGAGACTCACAACCATGACCTCATCCCACCTAAGTATATCCAGTTTGTTCCGGCATATCGAACGATGACTGACGCTGATAAAGCACAGGCTGATAGTTTGCACTTTTATGGTTATCGGACAAATGAACTTTTATCCGATTTTAAATCATTGTTTACAACTCCTGTGTTGACCACGTGTCTTCAAGACATTGAGAAGCAAGCGGCCGATATTTTCACCAGAAGCATGTTTAAAGAGGTTCGGTGTGAGATAGAAGAAGCTGTCAAATTAAATGTTGTTACACATTCAGTAAGCAACAATGAAGTTAAGTCGGCATCAAAGAACCGAGATGACTTCATGGAGATTAGAGATGACATTTTTGGACTAATCCAAAAACTTAAAAAGAGACGCGATCCTGACTCCAATGTTCTTTCTAATGCGTGTATGGTCGGTGACCCAACTGTTGTGAAGACAAAGGGAGCCCCTCGTCAAAATAGATGGGCAATAAAATCTCGTAAGTATTCTCATTGTACACGTCGTGGTCATACGATTCGAAGGTGTCCAGAATTACACAGTAGAGACGTCCTACATACTGGTCATCACCAATCGAGTGATGAACTCAATGATGAGAAGATTGATGTCCAAATCGATTCTATTGAGATATCTTCCAAGTATTTTATATAA 1149 0.3795 MNIDDNKNLKESIECDELCFGYDSSSDKEEENLINNENEFSESMEVSNCSYKIQEVEKKLNELSYDDMWGIEFDTVDQCCDFYRNYAKVHGFVARLDEKGQDFNGNLNMRQMVCNREGTRRKKYLEMENRKKDHKPITRVMCQANIRFHYDLILQKWRVTKFEETHNHDLIPPKYIQFVPAYRTMTDADKAQADSLHFYGYRTNELLSDFKSLFTTPVLTTCLQDIEKQAADIFTRSMFKEVRCEIEEAVKLNVVTHSVSNNEVKSASKNRDDFMEIRDDIFGLIQKLKKRRDPDSNVLSNACMVGDPTVVKTKGAPRQNRWAIKSRKYSHCTRRGHTIRRCPELHSRDVLHTGHHQSSDELNDEKIDVQIDSIEISSKYFI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2738 382 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Amo12g2738 382 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 245 - -
Amo12g2738 382 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 26 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2738 Amo-Chr12 112968865 112973122 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g2738 FAR1 1.9e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2738 - - aip:107607226 401.364