Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2737 ATGGTGGCAAAGTATAGTAACTTTGCTTTGCTTGTTACAGCAGTGGTGCTTGTGTTTTCTACCACAACCTCTTATAGGATATTCCCACCAAATGCACCCAACCTCACCACCGCGGCACCGGCTTTGTCTTCCTTCAATAATTCAGAGAGACAGGCTTTAATACAGAGTGGTTGGTGGAGTTATTACCACAATCTCTCAAACTCAAATCATTGCTATTGGATTGGCATCTACTGTAAAACAGCAGGAAGTGTTTCAGAGATTGATGGATGGGAATTGGATATTAATTCCAAATTTTTGCTTCTACAGAACTTGAATCTCACCGCCTTTTCGAATTTGGTCTCTTTGAATCTTCATGGAATGGGACTTTCTGGAAGCATCCCAAAAGAAATTGGTACCCTTACAAAGCTTGCTGGTCTTGATCTATCCAATAATAATCTTCATAGTGAGTTACCTTCAACACTTTCAAACCTCACTCAACTTGTGGAATTAAATGTTTCTTTCAATTCTCTTAGTGGCATCATTCCTTCTACTTTGGGTCTATTGGATGAATTGGAATACCTCACTCTCACTTCAAACCAAATTGAAGGTTCCATACCACTAGAACTTGGGAAGGTGAATTTGAAATATCTCAACCTTGAATCAAATCAAATTGGAGGTTCTATACCAGCACAAATAGGGAATTTAACAAGCTTATTCGCACTATATCTTTCCAATAACTCCTTTTCTGGTTCAATCCCCTTTCAAATAGGAGCTTTAACTCAGTTGCAAGAGTTGTACATAGGGTTCAATCAGATTAATGGTTCTATTCCCTCACAATTTAAAAACTTGTCTAATCTACAAGTTTTAGATCTTTCTTATAACAAGTTGTCTGGTGTTATTCCTCCACAACTTTTTCTACTTGCCAGCTTGAATTCTTTACTTCTCTCATCAAATCAATTGTTTGGTTCAATTCCATCAAATATTGCTAACACAAATATTTCATATCTTAATCTCTCTCACAACAAGCTAACAGGGCCTATTCCATTTCCTATCCATACTTGTTCTTCCCATTTGACACTAGATTTAAGTTACAACTTGTTGAATGGAAACATAGTTTCTCAAACTGGTTGTGTTGTTAATCTGAACCTTAGTCATAATTCTCTCAGTGGTGACATCCCATCTACCTTTAGTGTGAATTCAATGATGGAGAGTTTGGATCTCAGTTATAATAATTTCACAGGTAAACTGCACAAGGAACTTGCTAATCTCGAATACATAAACCTTTCATACAATTCTCTTGACTTTTCTCAAGACACTGATTATTGTTACTTTCAACAAGAGTCATTAATCGGTTGCAACACACCAAACTTCGCATCCTGCCATTTTACCCCAAAAACCATGCTTCCACATACCAGTAAAACTAAGCACCTCCTTGTAATAGCTCTTCCTGTCACATTCATCATTCTTTTCACAATTCTGGCATCACTGTTGTGGGCAAGACGTACGAAAAGTAGAAAAATTGAGGTGGAAAGAACATCAAAGAATGGAGACTTGTTTTCTATATGGAACTATGATGGGAAAATTGCATTTGAAGATATCATTGAAGCAACACAGGACTTTGATATCAGATATTGCATAGGAACTGGTGCATATGGTAGTGTATATAGAGCACAACTTCCAAGTGGCAAAGTTGTTGCAGTGAAGAAACTTCACCAAAGGGAGTCACAGAATCCTTCTTTTGACAAGAGCTTTCGCAACGAGGTAAAGATGTTAACAGAAATCCGCCATAGAAACATTGTCAAGCTCCACGGATTTTGTCTTCATAGTCAGTGTATGTTTCTAATTTATGAATACATGGAAAGGGGAAGCTTATTTTATGCCTTGAGAATTAATGATGAAGCTGAGGAGCTAACTTGGAGCCATAGGGTGAATATACTTAGTGGAGCTGCTAATGCTTTGTCTTACATGCATCATGATTGTTCCCCACCAATAGTTCACAGAGATGTAACAAGCAACAACATTTTGTTGAACTCAGAGTTGCATGCTGTTGTCTCTGACTTTGGCACCGCTAGAGTTCTTGATCCAGATTCTTCAAACCAAACCTTGAAAGTTGGAACATATGGATATCTTGCTCCAGAATTGGCATATACATTGAGTGTAACAGAAAAATGTGATGTATATAGTTTTGGAGTGGTGGCATTGGAAACAATAATGGGAAGACATCCAGGAGATCTTATCTTGTCTTTGTTCAACTCTTCTAACAAAAACATAATGGTAAAAGATCTCTTGGATTCACGCATCAGTTTACCATTATGTCAAAAGGATGCTCAAGCTATAGTTCAAGTGGTAACATTGGCATTGACATGCTTGCGCTCTAATCCAAAATCAAGACCATCAATGCAGCAAGTGGCTCATGAACTTTCTAATTTCAAACAATCATCACTGTCTTTGCCTTTGTCTGAAATCACAGTCCATCAACTGATAGCTTAG 2469 0.3759 MVAKYSNFALLVTAVVLVFSTTTSYRIFPPNAPNLTTAAPALSSFNNSERQALIQSGWWSYYHNLSNSNHCYWIGIYCKTAGSVSEIDGWELDINSKFLLLQNLNLTAFSNLVSLNLHGMGLSGSIPKEIGTLTKLAGLDLSNNNLHSELPSTLSNLTQLVELNVSFNSLSGIIPSTLGLLDELEYLTLTSNQIEGSIPLELGKVNLKYLNLESNQIGGSIPAQIGNLTSLFALYLSNNSFSGSIPFQIGALTQLQELYIGFNQINGSIPSQFKNLSNLQVLDLSYNKLSGVIPPQLFLLASLNSLLLSSNQLFGSIPSNIANTNISYLNLSHNKLTGPIPFPIHTCSSHLTLDLSYNLLNGNIVSQTGCVVNLNLSHNSLSGDIPSTFSVNSMMESLDLSYNNFTGKLHKELANLEYINLSYNSLDFSQDTDYCYFQQESLIGCNTPNFASCHFTPKTMLPHTSKTKHLLVIALPVTFIILFTILASLLWARRTKSRKIEVERTSKNGDLFSIWNYDGKIAFEDIIEATQDFDIRYCIGTGAYGSVYRAQLPSGKVVAVKKLHQRESQNPSFDKSFRNEVKMLTEIRHRNIVKLHGFCLHSQCMFLIYEYMERGSLFYALRINDEAEELTWSHRVNILSGAANALSYMHHDCSPPIVHRDVTSNNILLNSELHAVVSDFGTARVLDPDSSNQTLKVGTYGYLAPELAYTLSVTEKCDVYSFGVVALETIMGRHPGDLILSLFNSSNKNIMVKDLLDSRISLPLCQKDAQAIVQVVTLALTCLRSNPKSRPSMQQVAHELSNFKQSSLSLPLSEITVHQLIA* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2737 822 Pfam Leucine Rich repeat 323 338 IPR001611 GO:0005515
Amo12g2737 822 Pfam Leucine Rich repeat 392 407 IPR001611 GO:0005515
Amo12g2737 822 Pfam Protein kinase domain 538 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2737 822 SMART LRR_sd22_2 181 202 - -
Amo12g2737 822 SMART LRR_sd22_2 252 278 - -
Amo12g2737 822 SMART LRR_sd22_2 133 159 - -
Amo12g2737 822 SMART LRR_sd22_2 204 230 - -
Amo12g2737 822 SUPERFAMILY Protein kinase-like (PK-like) 516 800 IPR011009 -
Amo12g2737 822 SUPERFAMILY RNI-like 106 429 - -
Amo12g2737 822 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 53 820 - -
Amo12g2737 822 ProSiteProfiles Leucine-rich repeat profile. 278 300 IPR001611 GO:0005515
Amo12g2737 822 Pfam Leucine Rich Repeat 206 228 IPR001611 GO:0005515
Amo12g2737 822 PRINTS Leucine-rich repeat signature 136 149 - -
Amo12g2737 822 PRINTS Leucine-rich repeat signature 276 289 - -
Amo12g2737 822 Gene3D Phosphorylase Kinase; domain 1 493 611 - -
Amo12g2737 822 Gene3D Transferase(Phosphotransferase) domain 1 612 811 - -
Amo12g2737 822 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 53 820 - -
Amo12g2737 822 Gene3D Ribonuclease Inhibitor 40 204 IPR032675 -
Amo12g2737 822 ProSitePatterns Tyrosine protein kinases specific active-site signature. 657 669 IPR008266 GO:0004672|GO:0006468
Amo12g2737 822 Pfam Leucine rich repeat 254 313 IPR001611 GO:0005515
Amo12g2737 822 Pfam Leucine rich repeat 135 194 IPR001611 GO:0005515
Amo12g2737 822 ProSiteProfiles Protein kinase domain profile. 533 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2737 822 CDD STKc_IRAK 539 800 - -
Amo12g2737 822 SMART LRR_typ_2 413 436 IPR003591 -
Amo12g2737 822 SMART LRR_typ_2 181 205 IPR003591 -
Amo12g2737 822 SMART LRR_typ_2 252 275 IPR003591 -
Amo12g2737 822 SMART LRR_typ_2 157 180 IPR003591 -
Amo12g2737 822 SMART LRR_typ_2 133 156 IPR003591 -
Amo12g2737 822 SMART LRR_typ_2 276 300 IPR003591 -
Amo12g2737 822 SMART LRR_typ_2 206 228 IPR003591 -
Amo12g2737 822 ProSitePatterns Protein kinases ATP-binding region signature. 539 562 IPR017441 GO:0005524
Amo12g2737 822 Gene3D Ribonuclease Inhibitor 205 452 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2737 Amo-Chr12 112927558 112930361 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2737 106 705 Receptor kinase-like Gene Family AT4G08850 37.953 1.41e-125 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo12g2737 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2737 - - gmx:100789677 863.988