Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2709 ATGGGTTCGAAACCGTGGCTCTACCCTGCTCCTACGTATCGGCCATTAGAGACGTTTTGGGACACTGATGAAGACGCGCCGGGGCCACGATGCGGCCACACACTCACCGCCGTCGCCGCCACCAAATCTCACGGACCAAGGCTTATCCTTTTCGGCGGCGCCACCGCCATCGAGGGAGGATCTTCCTCAGCTCCCGGAATCAGGTTAGCTGGAGTTACCAATTCGGTTCATTCGTATGATGTTCTAACGAGAAAATGGAGTAGTCTTAAACCTGCCGGAGAGCCTCCATCCCCTCGGGCAGCTCATGCTGCTGCCGCCGTTGGTACTATGGTTGTTTTTCAGGGTGGCATAGGTCCTGCTGGGCATTCTACTGATGATCTCTATGTGCTTGACATGACCAATGATAAATTCAAATGGCACAGAGTTGTTGTACAAGGGCAAGGACCTGGACCTCGCTATGGCCATGTAATGGATTTGGTTGCTCAGAGATATCTTGTTACTGTCAGCGGAAATGATGGGAAAAGAGTTGTTTCTGATGCTTGGGCTTTGGATACGGCACAAAAACCTTACATGTGGCAGAAGCTGAACCCAGAAGGTGATAGACCTTCTGCTAGAATGTATGCTACTGCTAGTGCTCGTTCAGATGGAATGTTTTTGCTTTGTGGTGGAAGAGACTCTTCTGGAGCGCCACTAGCAGATGCATATGGACTGCTCATGCATAGGAACGGCCAGTGGGAATGGACACTCGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTGCACGTTACAGGAGGTGTTCTCAAAGGTGGACGGGCTGTAGAAGGTGAAGCAGCCATTGCAGTACTCGACACAGCGGCTGGGGTTTGGTTGGATAGAAATGGCATTGTGGCCTCGTCACGCCCAAACAAAGGTCATGATTATGACCCTCCTTTGGATCTTTTGCGTCGTTGTCGGCATGCAGCAGCGGCCGTTGGTGTTCGTATATACATCTATGGTGGTCTTAGAGGAGTTATTTTCTGCAGATTCACTCTAGATGATTTATTAGTGGCAGAAAATTCACCCTTTCAATCTGACAGTAATTCTCCTGTGTTAACATCTGAGAGAACTTCACCTATTTCAAGCCCCAAATTTGGCCAGTCTAATGTAAATTATAACGTAACAACACCAAGTTCAGATTCTGGGCCAGATGTTCCCTCATCTGGTGGCTTAGGAATGGACAGAAACTCCATGGAGAAACTTAGGGAAGCATCAGCTGCAGAAGCTGAGGTAGCGAATGCAGTCTGGCAAGCTGTGCAGGCATCAAATAGTCCTGCTGAAGAAACATCGCTATCAGATGACAACTCACAAGCCGCAGAAACAGTTTCAGATGGCAGTGACACAGAAGGCGATGTTCGCCTTCATCCCAGAGCTGTTGTAGTTGCTAAAGAGGCTGTAGGTAACCTAGGTGGAATGGTGAGACAGCTATCGCTGGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCTGTAAATAATGATACACCATATCCTACCAAAAAATTCACTAGGCAGAAATCCCCTCAGGGATTACATAAAAAGACGATTCTTCTTGATTCTTATGAAGTCGGTGAATTATGCTATGCTGCCGAGCAAATATTTATGCAAGAACCAACTGTTCTTCAGTTAAAAGCTCCTATCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGACTATTTGATGAATATGGATTTCCTTCAACTGCGGGAGACATCACGTATATTGACTATCTGTTTTTGGGAGATTATGTTGATAGAGGACAGCACAGCTTGGAAACCATTACCTTGCTGCTTGCACTTAAGATTGAGTATCCTGAGAATGTTCACCTGATACGTGGTAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATTGAGTGCATTGAAAGGATGGGGGAAAATGATGGAATCTGGGCATGGACGAGGTTCAATCAACTTTTCAACTATCTTCCACTTGCAGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGCATTGGAAGGTCTATCAATTCTGTAGAACAGATAGAGAAGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTGATGGACCTTCTGTGGTCCGATCCTACAGAAAATGACAGTGTAGAGGGTTTGAGACCAAATGCCAGAGGACCAGGCCTTGTCACTTTTGGGCCTGACCGTGTAACCGAGTTCTGCAAGAAAAATAAACTACAGCTAATTATAAGGGCCCATGAATGCGTCATGGATGGCTTTGAACGATTCGCACAGGGACAATTGATTACGCTTTTTTCTGCAACTAACTATTGTGGAACGGCAAACAATGCTGGTGCCATACTGGTCGTTGGCCGGGGCTTGGTAGTGGTTCCAAAATTGATCCACCCCTTACCGCCACCCCTTCAGTCTCCAGAGACATCTCCTGAGCGCGTCATGGATGAAACATGGATGCAGGCCACCAACTCCGACACGGGTCGACCACAGCCAGACCTTGACCGCGGCTCGCTAGCATACATATGA 2598 0.4681 MGSKPWLYPAPTYRPLETFWDTDEDAPGPRCGHTLTAVAATKSHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVLTRKWSSLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDMTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYMWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLKGGRAVEGEAAIAVLDTAAGVWLDRNGIVASSRPNKGHDYDPPLDLLRRCRHAAAAVGVRIYIYGGLRGVIFCRFTLDDLLVAENSPFQSDSNSPVLTSERTSPISSPKFGQSNVNYNVTTPSSDSGPDVPSSGGLGMDRNSMEKLREASAAEAEVANAVWQAVQASNSPAEETSLSDDNSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPVNNDTPYPTKKFTRQKSPQGLHKKTILLDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMDETWMQATNSDTGRPQPDLDRGSLAYI* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2709 865 Pfam Calcineurin-like phosphoesterase 568 775 IPR004843 GO:0016787
Amo12g2709 865 ProSitePatterns Serine/threonine specific protein phosphatases signature. 637 642 IPR006186 GO:0016787
Amo12g2709 865 SUPERFAMILY Metallo-dependent phosphatases 534 832 IPR029052 -
Amo12g2709 865 MobiDBLite consensus disorder prediction 442 473 - -
Amo12g2709 865 PIRSF STPPP_BSU1 1 865 IPR012391 GO:0004721|GO:0009742
Amo12g2709 865 Gene3D - 8 194 IPR015915 GO:0005515
Amo12g2709 865 MobiDBLite consensus disorder prediction 844 865 - -
Amo12g2709 865 Gene3D - 502 842 IPR029052 -
Amo12g2709 865 MobiDBLite consensus disorder prediction 442 466 - -
Amo12g2709 865 PRINTS Serine/threonine phosphatase family signature 704 731 IPR006186 GO:0016787
Amo12g2709 865 PRINTS Serine/threonine phosphatase family signature 636 660 IPR006186 GO:0016787
Amo12g2709 865 PRINTS Serine/threonine phosphatase family signature 568 595 IPR006186 GO:0016787
Amo12g2709 865 PRINTS Serine/threonine phosphatase family signature 674 700 IPR006186 GO:0016787
Amo12g2709 865 PRINTS Serine/threonine phosphatase family signature 786 802 IPR006186 GO:0016787
Amo12g2709 865 PRINTS Serine/threonine phosphatase family signature 764 784 IPR006186 GO:0016787
Amo12g2709 865 PRINTS Serine/threonine phosphatase family signature 603 630 IPR006186 GO:0016787
Amo12g2709 865 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 865 - -
Amo12g2709 865 Pfam Kelch motif 96 133 - -
Amo12g2709 865 MobiDBLite consensus disorder prediction 364 417 - -
Amo12g2709 865 SUPERFAMILY Kelch motif 73 349 IPR015915 GO:0005515
Amo12g2709 865 MobiDBLite consensus disorder prediction 364 407 - -
Amo12g2709 865 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 865 - -
Amo12g2709 865 SMART pp2a_7 540 826 IPR006186 GO:0016787
Amo12g2709 865 Gene3D - 195 378 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2709 Amo-Chr12 112520297 112527355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2709 548 767 Calmodulin-binding Proteins AT5G63870 30.469 1.10e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2709 K01090 - gmx:100805538 1563.51