Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2707 ATGATATACTTTCTCCTTTTCTTTTCCATATACGATAGAAATGAATCAGAACTCATCCAAGATATTGTCAAGAATATTTCGGAGAAATTATCGCATCTTTTTTCAAATGCACCCCAAGACCTTGTCGGAATTGATGAGCATTTTAAATTTTTTCAACCTTTAATGGCAATGGAGTCTGATGAAGTTCGAACTGTGGGGATTTGGGGGATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATTCGACAGATATGCCTCTCGATATGAAGGTTGCTGCTTTCTACAAAATGTAAGAGAAGAATCTCAGAAGTCTGGTGAACACAACTTATATGAGAAACTTATTTCTGAACTACTTGAGGGAGAACATCTCCTTGTGAAAGGATCAGCCCATGCAAGATCTATGTATGTTAAGAGAATGTTGAGTCGGAAAAAGGTGCTCATAGTGCTTGATGATGTGGATGCATTAGACAAGTTAGATTATCTAACAAGAGAAGCAATCTGTCTGGGAGCAGGTAGTAGGGTCATTGTAACAACAAGAGACGAGCAAATTCTAATTGCTAAAGGAGTGGATATAAGATACAAGGTTTGGGGATTGAGCTTTGAGAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTGTCCTGAACATGGATACCAAGAGCTTTCAGAAATGGCGGTTAATTATGCAGAAGGCATTCCATTAGCATTGAAAGTATTGGGATCCTTTCTACACTCAAGGAGCATAAAAGAATGGGAAAGTGCATTGAGAAAACTCAGGGTTCATTCTAATGTGGACATCTATAATGTCTTAAAATTGAGTTATGATGGATTAGATGATTCAGATAAGAACATATTCCTTGACATTGCATTCTTTTTCAGAGGAGAATACATGGATAATGTTATAAGCTTTCTAGACTCTTGTGGTTTCTTTGGCGACATTGGAATAAGCACTCTTGAGCGTAAAGCTCTTATAACTATTTTCGGCAATAGAATAGGAATGCATGACTTGATACAACAAATGGGTTGGGAAGTCGTTCGCCGAGAATCAAACAAAGATTCTGGAAAGCTCACTCGAATAAATAAAGCTGAAGATTTCTGCAACTTATTGAAAAATAGTGAGGAAAAAAGTTTAGTAGAAGGCATTATGATAGACTTGTCCCAAATTGGAGATTTACACTTAAATGCCGACACCTTTAAAAATATGCCTCGTCTAAGATTTCTTAAGTTTTATGATCCTTMGYATCGAAGACAGTCCAAAGTCCATGTTCCCACAACCCTGGACCCGTTTCCGGCAAAACTCAGCTATTTGGAGTGGAATAGTTGTCCTCTGAATTCTCTACCATTAAGGTTTTGTGCAGAAAAACTTGTTGAGCTTAGGATGACTAACAGTCAAATTTCTAAACTCTGGGATGGAGCACAGGATTTTGTGAATTTGACAAAGCTTGACCTTAGTGGATGTATAAAGTTGGTAGAGCTCCCAGACTTGAGTAAAGCAACGAAGTTTAAAAGGTTAAACCTTTGGGGTTGTGAAAATCTATGTCAACTTCATCCATCTATTTTATCCATCCAAACACTTGAGGAATTGCAGCTTTATGGTTGCAAAAAATTGAAGAGTGTCAAAGGCAACACATATTTGAAATCTCTTAAAAGACTCGAGGTTCGAATGTGCTCAAGCCTGGAGGAATTTTCGGTGTCATCAGAGAAACTGACGACTTTGTATTTATCTTTTTTGAGAATTAAGAGTGTACCATATGAATTATATTGCTCTACATATCTTGTGTGTCTTTGTCTTTGGGATTGCAAAGAGCTAATTGAGCTTCCACACCATATCAAAACCCTATCAAGCTTATTGACTCTGGACGTAAGTGGTTGTTTTAGTCTTCGATCTATACCGGAGCTTCCACCATCTATTGAAGTGCTTCTTGCTAATGACTGCACATCACTGGAAAGAATATTCAGTTTGAAGGCAGAATTTAGTTTGAACAGAAGACATCTCTCATTTGAAAATTGCGTGAAATTGGAAGAGGAGTCGCTGAATGATATTGCAGAAGATGCCCATCTCACAATATTGAGAAATGTTTTGTTTTTTTTAACAGGTAAATATCAGATGATAAATTATTATCATTATCCTAGAATGGATGGTCGTATTTGTTATCCAGGGTACAAAGTTCCAGAGTGGTTTGGATGTCAGACAACAGAAGCGTCCATAACAATTGAACTTGATCAACCTTACTACCAATTGTTGGGTTTCATCTTCTGTTGTGTTGTTTCTCAAAACTTACCTCCTCCTTTTTTTAATAAATGGGGTTTTCTCAACATTAGGTGTGAATACGGCCACTTCGGAGATGATGTAAAGCACACATTTCTAATTACAAGGCGAAACTTTGTTCCTGAAAGACGACGGAACTCTGAAGATCACGTTTTTATTTGGACATATCAATTTCCTGATGAAGACATGTTTAGGGAAATTGAAATGTGTGATGATGATGACAGTACTAGCAACCAAAAGATGTCATTCGGATTCAGTGTTGATAGACATGATGAATATGGGAAGAGAGTAGAAGAATGTAAAAAACATTATTTTATAAAAGGGTGTGGAGTTGTGCCAATGTATGCCTCAACTGTCGTGGATGTCATTCAAAAACTTGAATTGGAGTTGAACCCTCATCGTCATAACTCCATCACAAGGCAGAGTATAGACGCACTGAAAAGCAAGATGATCCGGAAGATTAAAGGAAAATCACATCGACTCTTGAAGAAAGTAATCTGGATTTAA 2790 0.3731 MIYFLLFFSIYDRNESELIQDIVKNISEKLSHLFSNAPQDLVGIDEHFKFFQPLMAMESDEVRTVGIWGMGGIGKTTIARAIFDRYASRYEGCCFLQNVREESQKSGEHNLYEKLISELLEGEHLLVKGSAHARSMYVKRMLSRKKVLIVLDDVDALDKLDYLTREAICLGAGSRVIVTTRDEQILIAKGVDIRYKVWGLSFESSLELFCLKAFHKSCPEHGYQELSEMAVNYAEGIPLALKVLGSFLHSRSIKEWESALRKLRVHSNVDIYNVLKLSYDGLDDSDKNIFLDIAFFFRGEYMDNVISFLDSCGFFGDIGISTLERKALITIFGNRIGMHDLIQQMGWEVVRRESNKDSGKLTRINKAEDFCNLLKNSEEKSLVEGIMIDLSQIGDLHLNADTFKNMPRLRFLKFYDPXXRRQSKVHVPTTLDPFPAKLSYLEWNSCPLNSLPLRFCAEKLVELRMTNSQISKLWDGAQDFVNLTKLDLSGCIKLVELPDLSKATKFKRLNLWGCENLCQLHPSILSIQTLEELQLYGCKKLKSVKGNTYLKSLKRLEVRMCSSLEEFSVSSEKLTTLYLSFLRIKSVPYELYCSTYLVCLCLWDCKELIELPHHIKTLSSLLTLDVSGCFSLRSIPELPPSIEVLLANDCTSLERIFSLKAEFSLNRRHLSFENCVKLEEESLNDIAEDAHLTILRNVLFFLTGKYQMINYYHYPRMDGRICYPGYKVPEWFGCQTTEASITIELDQPYYQLLGFIFCCVVSQNLPPPFFNKWGFLNIRCEYGHFGDDVKHTFLITRRNFVPERRRNSEDHVFIWTYQFPDEDMFREIEMCDDDDSTSNQKMSFGFSVDRHDEYGKRVEECKKHYFIKGCGVVPMYASTVVDVIQKLELELNPHRHNSITRQSIDALKSKMIRKIKGKSHRLLKKVIWI* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2707 929 Gene3D Ribonuclease Inhibitor 380 547 IPR032675 -
Amo12g2707 929 Gene3D Ribonuclease Inhibitor 548 691 IPR032675 -
Amo12g2707 929 Gene3D - 17 191 IPR027417 -
Amo12g2707 929 Pfam NB-ARC domain 54 269 IPR002182 GO:0043531
Amo12g2707 929 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 765 IPR044974 GO:0006952
Amo12g2707 929 Pfam Leucine Rich Repeat 459 478 IPR011713 -
Amo12g2707 929 SUPERFAMILY L domain-like 385 682 - -
Amo12g2707 929 Pfam C-JID domain 724 878 IPR045344 -
Amo12g2707 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 293 IPR027417 -
Amo12g2707 929 SUPERFAMILY "Winged helix" DNA-binding domain 270 374 IPR036390 -
Amo12g2707 929 Gene3D - 200 283 IPR042197 -
Amo12g2707 929 PRINTS Disease resistance protein signature 64 79 - -
Amo12g2707 929 PRINTS Disease resistance protein signature 616 632 - -
Amo12g2707 929 PRINTS Disease resistance protein signature 234 248 - -
Amo12g2707 929 PRINTS Disease resistance protein signature 141 155 - -
Amo12g2707 929 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2707 Amo-Chr12 112490746 112494098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2707 8 637 WRKY Transcription Factor Family AT4G12020 33.333 1.31e-87 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2707 - - ahf:112754566 1281.54