Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo12g2705 | ATGGCATATTCTCCTTTCTCTAGTTCATCTGCTTTCAATGTTCCTCTAATCAAACATGATCTCTTCGTCAGTTTTCGAGGAACAGACATTCGCACTTCTTTTCTTAGTCATTTGGCAACAAACTTGAAGCGTAATCAAATTGATTTCTTTGTTGACGATGAAAAGCTTCATCCTGGAGATGAGATTTCATCCACCCTCCTTCGAGCAATCGAGCAATCATACATTTCATTGGTCATCTTCTCGGAACACTATGCTTCTTCAAGATGGTGTTTGGAGGAGCTTGTGAAGATTATTGAATGCATGGAACAGTATAAAAGGATTGTGATACCTGTTTTTTATAATGTTGATCCTTCTCATGTAAGGCATCAAAAAGGAACTTTTGCAGAAGCTTTTGATGTCCACAAAAAGAGATATGAGGAGGAAATTATGCAGAATTGGAAATCTGTTCTCGAGAAGACGGCAAATTTATCTGGAATTCATTATCCATCGAAATATCGAAATGAATCAGAACTCATCCAAGATATTGTCAAGAATATTTCGGAAAAATTGTCGCATCTTTTTTCAAATGCACCCCAAGACCTTGTCGGAATTGATGAACATTTTAAATTTTTTCAACCTTTAATGACAATGGAGTCTGATGAAGTTCGAACKGTGGGGATTTGGGGGATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATTTGATAGATATGCCTCTCGATATGAAGGTTGCTGCTTTCTAGAAAATGTAAGAGAAGAGTCACAAAAGTCTGGTAAACACAGCTTATATGAAAAACTTATTTCTGAACTACTTGAGGGAGAACATCTTGTGAAGGGATCAACCCATGCAAGATCTATTGATGTCAAGAGAAGGTTGAGTCGGAAAAAGGTGCTCATAGTGCTTGATGATGTGGATGCATTAGACAAGTTAGATTATCTAACAAGAGAATCAATCTGTCTGGGAGCTGGTAGTAGGGTCATTGTAACAACAAAAGACGAGCAAATTCTAATTGCCAATGAAGGAGTGGATATAAGATACAAGGTTTGGGGATTGAGCTTTGAGAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTATCCTGAACATGGATATGAAGAGCTTTCAGAAATGGCAGTTAATTATACAGAAGGCATTCCATTAGCATTGAAAGTATTGGGATCCTTTCTACACTCAAGGAGCATAAAAGAATGGGAAAGTGCATTGAAAAAACTCAGGGTTCATCCCAATGTGGACATCTACAATGTCTTAAAATTGAGTTATGATGGTTTAGATGATTTAGATAAGAATATATTCCTTGACATTGCATTCTTTTTCAGAGGAGAATACAAGGATAATGTTATAAGCTTTCTAGACTGTTGTGGTTTCTTTGGCGACATTGGTATAAGCACTCTTGAGCGTAAAGCTCTTATAACTATTGTTGGCGATATAATAGATATGCATGACTTGATACAACAAATGGGTTGGGAAGTCGTTCGCCAAGAATCAAATAAAAATTCTGGAAAGCTCACTCGAATAAATAAACCTGAAGATTTCTGCAACTTATTGAAAAATAGTGAGGAAAAAAGTTTAGTAGAAGGCATTATGATAGACTTGTCCCAAATTGGAGATCTACACTTGAAATCGGACACCTTTAAAAATATGCCCCATCTAAGATTTCTTAAGTTTTATGCTCCTTGGTTTCGAAGACAGTGCGAAGTCTATGTTCCCACAACCCTGGACCCGTTTCCTGCAAAACTCGTCTATTTGGAGTGGGATAGTTGTCCTCTGAATTCTCTACCATCAAGGTTTTGTGTAGAGAAACTTGTTAAGCTTAGGATGTGTAACAGTCAAATTTCTAAACTCTGGGATGGAGCACAGGTACTAATACTAATAGTCTAA | 1914 | 0.3715 | MAYSPFSSSSAFNVPLIKHDLFVSFRGTDIRTSFLSHLATNLKRNQIDFFVDDEKLHPGDEISSTLLRAIEQSYISLVIFSEHYASSRWCLEELVKIIECMEQYKRIVIPVFYNVDPSHVRHQKGTFAEAFDVHKKRYEEEIMQNWKSVLEKTANLSGIHYPSKYRNESELIQDIVKNISEKLSHLFSNAPQDLVGIDEHFKFFQPLMTMESDEVRTVGIWGMGGIGKTTIARAIFDRYASRYEGCCFLENVREESQKSGKHSLYEKLISELLEGEHLVKGSTHARSIDVKRRLSRKKVLIVLDDVDALDKLDYLTRESICLGAGSRVIVTTKDEQILIANEGVDIRYKVWGLSFESSLELFCLKAFHKSYPEHGYEELSEMAVNYTEGIPLALKVLGSFLHSRSIKEWESALKKLRVHPNVDIYNVLKLSYDGLDDLDKNIFLDIAFFFRGEYKDNVISFLDCCGFFGDIGISTLERKALITIVGDIIDMHDLIQQMGWEVVRQESNKNSGKLTRINKPEDFCNLLKNSEEKSLVEGIMIDLSQIGDLHLKSDTFKNMPHLRFLKFYAPWFRRQCEVYVPTTLDPFPAKLVYLEWDSCPLNSLPSRFCVEKLVKLRMCNSQISKLWDGAQVLILIV* | 638 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo12g2705 | 637 | Pfam | NB-ARC domain | 207 | 422 | IPR002182 | GO:0043531 | |
Amo12g2705 | 637 | SUPERFAMILY | "Winged helix" DNA-binding domain | 423 | 527 | IPR036390 | - | |
Amo12g2705 | 637 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 13 | 631 | IPR044974 | GO:0006952 | |
Amo12g2705 | 637 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 17 | 158 | IPR035897 | - | |
Amo12g2705 | 637 | Pfam | Leucine Rich Repeat | 612 | 631 | IPR011713 | - | |
Amo12g2705 | 637 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 184 | 446 | IPR027417 | - | |
Amo12g2705 | 637 | Gene3D | - | 16 | 180 | IPR035897 | - | |
Amo12g2705 | 637 | ProSiteProfiles | TIR domain profile. | 17 | 183 | IPR000157 | GO:0007165 | |
Amo12g2705 | 637 | Pfam | TIR domain | 18 | 192 | IPR000157 | GO:0007165 | |
Amo12g2705 | 637 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 13 | 631 | - | - | |
Amo12g2705 | 637 | PRINTS | Disease resistance protein signature | 293 | 307 | - | - | |
Amo12g2705 | 637 | PRINTS | Disease resistance protein signature | 217 | 232 | - | - | |
Amo12g2705 | 637 | PRINTS | Disease resistance protein signature | 387 | 401 | - | - | |
Amo12g2705 | 637 | SMART | till_3 | 18 | 156 | IPR000157 | GO:0007165 | |
Amo12g2705 | 637 | Gene3D | - | 353 | 436 | IPR042197 | - | |
Amo12g2705 | 637 | Gene3D | - | 181 | 343 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo12g2705 | Amo-Chr12 | 112436426 | 112444195 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo12g2705 | 3 | 632 | WRKY Transcription Factor Family | AT4G12020 | 31.094 | 7.84e-76 | 263 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo12g2705 | - | - | aip:107627899 | 878.626 |