Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2704 ATGGCAATGGAGTCTGATGAAGTTCGAACTGTGGGGATTTGGGGGATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATTCGACAGATATGCCTCTCGATATGAAGGTTGCTGCTTTCTACAAAATGTAAGAGAAGAATCACAAAAGTCTGGTAAACACAGCTTATATGAGAAACTTATTTCTGAACTACTTGAGGGAGAACATCTTGTGAAGGGATCAGCCCATGAAAGATCTATGTATGTCAAGAGAAAGTTGAGTCGGAAAAAGGTGCTCATAGTGCTTGATGATGTGGATGCATTAGACAAGTTAGATTATCTAACAAGAGAAGCAATCTGTCTGGGAGCAGGTAGTAGGGTCATTGTAACAACAAGAGACGAGCAAGTACTAATTGCTGCAAGAGTGCATGCAATATACAAGGTCCAAGAATTGAGCTTTAAGAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTATCCTGAACATGGATATGAAGAGCTTTCAAAAATGGCAGTTAATTACACAAAGGGCAATCCATTAGCATTAAAAGTATTGGGATCCTTTCTACACTCAAGGAGCATAAAAGAATGGAAAAGTGCATTGAAAAAACTCAGGGTTCATCCCAATGTGGAGATCTACAATGTCTTAAAATTGAGTTATGATGGATTAGATGATTCAGATAAGAACATATTCCTTGACATTGCATTCTTTTTCAGAGGAGCATACAAGGATAATGTTATAAGGTTTCTAGACTCGTGTGATTTCTTTGGCGACATTGGAATAAGCACTCTTGAGCGTAAAGCTCTTATAACTATTTTCAGCGATAGAATAGAAATGCATGATTTGATACAACAAATGGGTTGGGAAGTCGTTCGCCAAGAATCAAATAAAGATCCTGGAAAACTCACTCGAATAAATAAACCTGAAGATTTCTGCAACTTATTGAAAAATAGTGAGGAAAAAAGTTTAGTAGAAGGCATTATGATAGACTTGTCCCAAATTGGAGATCTACACTTAAATGCGGACACCCTTACAAATATGCCTCGTCTAAGATTTCTTAAGTTTTATGATCCTTCGGATCAAAGACAGTCCAAAGTCTACATTCCCACAACCCTGGACCCGTTTCCTGCAAAACTCAGCTATCTGGAGTGGAATAGTTGTCCTCTGAATTATCTACCATTAAGGTTTTGTGCAGAGAAACTTGTTGAGCTTAGGATGCCTTACAGTCAAACTTCTAAACTCTGGGATGGAGCACAGAATCTTGTGAATTTGACAAGGCTTGAACTTGGTGGATGTAAAAAGTTGGTAGAGCTCCCAGACTTCAGTAAAGCAACAAAGCTTATATCGATAGATCTTTGTAATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTATCCATCCAAACACTTGAGGGATTGTTTCTTGATGGTTGCAAAAAATTGAAGAGTGTCAAAAGCAACATATATTTGAAATCTCTAAAAGTACTCGGGGTTCAAAAGTGCTCAAGCCTGGAGGAATTTTCGGTGTCATCAGAGAAACTGACGACTTCGTATTTCTCTTTGTTGAGAATTAAGAGCTTACCACATGAATTCTATTGCTCTACATATCTTGTGTGTCTTGTTCTTTGGGATTGCAGAGAGCTAATTGAGCTTCCACACCATATCAAAACACTATCAAGCTTATTGACTCTTGACGTAAGTGGCTGTTGTAGTCTTCGATCTATACCGGAGCTTCCACCATCTATTCAAGTGCTTCTTGCTAATGGGTGCACATCACTGGAAAGAATATTCAGTTTGAAGGCAGCATTTAGTTTGAACAGAAGACAGATCTCATTTGAAAATTGCGTGAAATTGGAAGAGGAGTCGCTGAATGATATTACGGAAGATGCCCATCTCACAATATTGAAAAATGTTTTGTTTTCTTTGACAGGTCATTATCCGATGATAAATTATTATCATTATCCTAGAATGGATGGTCGTATTTGTTATCCAGGGTACAAAGTTCCAGAGTGGTTTGGATGTCAGACAACAGAAGCGTCCATAACAATTGAACTTGATCAACCTTACTACCAGTTGTTGGGTTTCATCTTCTGTTGTGTTGTTTCTCAAAACGTACCTCCTCCTTCTTTTAATAAATGGGGTACTCTCAATATCAGGTGTGAATACCGCCACTTCGGAGATGATGTTAAGCACACATTTCTAATTATAAGGCAAATCTTTGTTCCTGGAAGACGACGGAACTCTGAAGATCACGTTTTTATTTGGACTTATCAATTTCCTGATGAAGACATGTTTAGGGAAATTGAAATGTGTGATGATGATGACAGCACTAGCAACCAAAAGATGTCATTCAGATTCAGTGTTGATAGACCTGAWMAWMAMYYGAGAGTAGAAGAAAGGAAAAAACAGGTTTTTATCAAAGGGTGTGGGGTTTTGCCAATGTATGCCTCAACTGTCGTGGATGTCATTCAAAAACTTGAATTGGAGTTCAACTTGCAGTTGAACCCTCATCATCATAACTCCATCACAAGGCAGAGTATGGACGCACTGAAAAGCAAGATGATCCGGATGATTAAAGGAAAATCACATCGACTCCTGAAGAAGTAA 2622 0.3818 MAMESDEVRTVGIWGMGGIGKTTIARAIFDRYASRYEGCCFLQNVREESQKSGKHSLYEKLISELLEGEHLVKGSAHERSMYVKRKLSRKKVLIVLDDVDALDKLDYLTREAICLGAGSRVIVTTRDEQVLIAARVHAIYKVQELSFKSSLELFCLKAFHKSYPEHGYEELSKMAVNYTKGNPLALKVLGSFLHSRSIKEWKSALKKLRVHPNVEIYNVLKLSYDGLDDSDKNIFLDIAFFFRGAYKDNVIRFLDSCDFFGDIGISTLERKALITIFSDRIEMHDLIQQMGWEVVRQESNKDPGKLTRINKPEDFCNLLKNSEEKSLVEGIMIDLSQIGDLHLNADTLTNMPRLRFLKFYDPSDQRQSKVYIPTTLDPFPAKLSYLEWNSCPLNYLPLRFCAEKLVELRMPYSQTSKLWDGAQNLVNLTRLELGGCKKLVELPDFSKATKLISIDLCNCEKLCQLHPSILSIQTLEGLFLDGCKKLKSVKSNIYLKSLKVLGVQKCSSLEEFSVSSEKLTTSYFSLLRIKSLPHEFYCSTYLVCLVLWDCRELIELPHHIKTLSSLLTLDVSGCCSLRSIPELPPSIQVLLANGCTSLERIFSLKAAFSLNRRQISFENCVKLEEESLNDITEDAHLTILKNVLFSLTGHYPMINYYHYPRMDGRICYPGYKVPEWFGCQTTEASITIELDQPYYQLLGFIFCCVVSQNVPPPSFNKWGTLNIRCEYRHFGDDVKHTFLIIRQIFVPGRRRNSEDHVFIWTYQFPDEDMFREIEMCDDDDSTSNQKMSFRFSVDRPXXXXRVEERKKQVFIKGCGVLPMYASTVVDVIQKLELEFNLQLNPHHHNSITRQSMDALKSKMIRMIKGKSHRLLKK* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2704 873 Pfam C-JID domain 669 822 IPR045344 -
Amo12g2704 873 Gene3D Ribonuclease Inhibitor 277 650 IPR032675 -
Amo12g2704 873 Gene3D - 1 139 IPR027417 -
Amo12g2704 873 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 238 IPR027417 -
Amo12g2704 873 Gene3D - 145 228 IPR042197 -
Amo12g2704 873 SUPERFAMILY L domain-like 330 645 - -
Amo12g2704 873 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 710 IPR044974 GO:0006952
Amo12g2704 873 PRINTS Disease resistance protein signature 10 25 - -
Amo12g2704 873 PRINTS Disease resistance protein signature 561 577 - -
Amo12g2704 873 PRINTS Disease resistance protein signature 86 100 - -
Amo12g2704 873 PRINTS Disease resistance protein signature 179 193 - -
Amo12g2704 873 SUPERFAMILY "Winged helix" DNA-binding domain 215 319 IPR036390 -
Amo12g2704 873 Pfam Leucine Rich Repeat 404 423 IPR011713 -
Amo12g2704 873 Pfam NB-ARC domain 3 214 IPR002182 GO:0043531
Amo12g2704 873 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 6 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2704 Amo-Chr12 112374404 112380814 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2704 1 582 WRKY Transcription Factor Family AT4G12020 33.841 3.53e-86 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2704 - - ahf:112754566 1226.08