Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2695 ATGACCTCTAGGACATTGCTACTTTTCTTGGCCTTAATGGTGACAAATTCAATTGCTATCATGGACAAACAGACATATATAGTACACATGGACAAGACCAAGATCAAATCCTCAATTCATTCACAAGACAGCACTAAACCATGGTTTCAATCTGTCATTGATTTCATCACTGAGGTTTCAGTGCAAGAAGATGAAGAGGAAATAGCTCCTCAGCTTCTTTATGTCTATGAAACCAACATGTTTGGTTTTTCTGCACATCTTTCAAGTAAACAACTTGAATACTTGAACCAAGTTGATGGTTTCCTTGCAGCAATGCCTGATGAGCTATTAACCCTTCACACAACACACACCCCACATTTTCTTGGCCTACAAAATGGGAGAGGACTTTGGAGTGCTCCTAGTTTGGCCTCTGATGTGATCGTAGGGATCCTTGACACCGGTATATGGCCGGAACACATCAGTTTCCAAGACACTGGTTTGACCGAAGTACCCTCTAGATGGAAAGGTTCTTGTGAAGAAGGGACCAAGTTCTCTGCCTCAAATTGTAACAAGAAGCTAATTGGAGCAAGAGCCTTTTATAAAGGGTATGAAAAAGTTATCGGGAGAATCAATGAAACGCTGGATTATCGTTCGCCAAGAGATTCTCAAGGGCATGGAACACACACAGCCTCAACTGCAGCCGGTAACATGGTGAACAATGCAAGCCTATTCGGCATGGCTAAAGGTTCAGCAAGTGGAATGAGGTATACCTCAAAAGTTGCGGCTTATAAAGTATGCTGGCCACTAGGCTGCGCCAATTCGGATATATTGGCAGCTATGGATCAAGCTGTTGCTGATGGGGTAGACATATTGTCACTCTCTTTAGGCGGCATTGCAAAGCCTTACTACAATGATAGTATTGCCATAGCTTCATTTGGGGCAACTCAAAATGGAGTTTTTGTTTCTTGCTCTGCAGGGAATTCGGGCCCTTTCAGATCAACCGTTGGAAATGTTGCACCATGGATCATCACTGTTGCTGCTAGCTACACTGATAGAAGCTTTCCAACCAAAGTGAAGCTAGGGAATGGACAGGTTTTCAAAGGGGCATCTTTGTATCATGGCAAGACAATCCAATTGCCTCTTGTGCATGCTAATACCACAGGAACACAAAGGACAGCACAATTTTGCACCAAAGGTTCACTTGATCCAAAGCTAGTCCATGGAAAAATAGTTGCTTGTGAACGAGGAATGAATTCCAGAACTGAAAAGGGCGAGGTGGTGAAAATGGCAGGCGGGGCAGGAATGCTACTACTAGTGAATCAAGGAGAAGAGCTTTTTGCTGACTCTCACATTTTGCCAGCAACTTCCTTAGGTGCCTCAGCAAGCAATGCAATTCGGAACTACATCCACTCTGCCAAATCTCCAACAGCTTCAATTTCATTCATAGGAACAATGTATGGTGACCCTGCACCAGTTATGGCAGGATTTTCTGCTAGAGGGCCAAGTATAGTGGGGCCAGATGTGATTAAACCAGATGTAACTGCACCTGGTGTGAACATCTTGGCTTCATGGCCACCATTAACTGCTCCAAGCCTGCTTAAGAGTGACAAAAGGCGTGTGCTATATAACATAGTTTCCGGCACCTCGATGTCTTGCCCTCATGTTACCGGCATAGCAGCACTTCTCAAATCTGTGCACAAAGATTGGTCACCAGCAGCTATCAAATCTGCACTGATGACCACAGCTTACACAGTGAACAACAGAGGTTCCCCTCTTTTAGACATTGCATCGAACACCTCATCTGCATTCGCCAACCCTTTTGCATTTGGTTCAGGCCATGTCAACCCAGAATGTGCCTCTGATCCAGGGTTAGTCTATGATATCACCAACAAAGATTACCTAAACTACTTGTGCAGCCTTAACTATACTCCTACCCAAATTGCTATAATCTCAAAGGGTCATTTCAAATGCTCCAAAGATACATTTTTTCAACTTGGTGACCTAAACTACCCTTCATTTTCTGTCTCATTTGACATAAATGGCACAAATTCTAGTGTTACATACAAGAGGGTAGTCACAAATGTTGGATATCCTAGTAGTTCTTATACAGTGAAAGTTGAAGAACCAAATGGAGTATCAGTTAAGGTTGAACCAAGGAATTTGAGGTTTGGAAAATTAGGTGAGAAATTGAATTATAGTAATAATAATGGATCTCCAAGCCAAAATCGGAACTCTAGGTCTAGGAGCCCTTCTGATCATGCAAGAGCTCAATCTCCAATTCCACATGGTGGTTCTGATCCACATGCACCATCAACTCATCATCACCCTGCATATTCATTCTCTTATCCRCCGGGACCATATTCCRACAACTATTACCCTCCACCTCCTTTATCACCTTCTTCACACCCTTCTCTTCCACACTCACCATGTAGCCATAGATATGCATACACCTCACTTCCTGTGTCACCCAGCCCCGGTTCTAGCTCCCCTGGTCCTCCAATTAACCGCCCTCCGCCTCAATTGGTTGCCTTTAACCGCCCTCTTCCGCGATTAGACTATCCCCTGAGTATCGGGGGGCCAACAACTAAACGGCGGCCTCCACCACGGCTGGACTATCCTCTGAGTCCGGGGCAAAAGTCAGCTTATTCTCCACCTCATTATTATACTTTCCCCTACCATCAAGGTCCTAAAAGTCCAGGAGTATCATCACAATCTAGTCAGAGTCCCATTTCCAGCTCTCCTAGGAGTCCTTCRTTGGAAAATGTTATATGCAATGTTCAGATATCAGATAGCAAGCTCGGTGCTCCTGCATCACCCTCTGCTCCTGCATCACCCCCTGCTCCTGCTGCACAAACTGGCCCTTTTGCACCACATTTTGCGCATTCGAATTCAGTTCCATTTCATGGGAGGAATGATGAATTTAATGGTTGTTCGGATAAATTKTCAGGCAGGAGACGTTCTACCTCTGATGTAGGGGATTTAAAGACTTCGCCTAGTGTGTWTAATGAATCGCCACGTAACCAGAGTTTGCAGCTTGCAAGCTATAAAGGGTCTTCTTTGAGAGCTTTGCTTCTACATGGAAATTTAGATATATGGATTCATGAAGCCAATAATCTTCCAAATCTAGACATGTTCCACAGAACTTTGGGGGATATGTTTGGCAAAATGCCTGGTAGTCCGGGCAAGGGCAATACCAGCGATCCTTATGTGTCAATTCGTGTATCAAGTGCTGTGATTGGGAGGACTTTTGTGATTAAGAACTGTGAGGACCCCGTTTGGGAGCAGCATTTTTGTGTTCCTGTTGCGCATAATGCTGCTGAAGTTATCTTTCATGTTAAGGACAGTGACGTCGTGGGATCAGAACTCATTGGTGTTGTGGCGATTCCAGTCGAACAAATACACTCYGGGGAAGTAATAAAAGGGGCCTACCCGATTTTGAATAGTAATGGGAAACCTGTTAAGCAAGGTGCTGTATTGAGCCTAACCATACAGTACACTCCAATTGATAAACTAGTCATGTATCAACAAGGAGTTGGAGCAGGTCCTGAGTATATCGGGGTTCCCGGCACTTATTTTCCATTGAGGAGAGGTGGAACTGTTACTCTATATCAAGATGCTCATGTTCCAGATGGCTGTCTCCCTAATTTGATGCTTGATAATGAGATGCATTATGTGCATGGAAAGTGTTGGTTTGACATATTTCAAGCAATAAGTCAAGCTCAACGGTTGATATATATCACGGGCTGGTCAGTATGGCACAAAGTTCAGTTGATTAGGGATGCCGGCCCAACGGAAAGCCTTGGCCATCTTTTGAGGTCTAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTGTTTGGGATGACCCTACATCAAGAAACATCCTTGGTATACAAACYGATGGTCTCATGGCAACTCATGATGAGGAAACTCGAAAATTTTTCAAGCATTCTTCAGTACAAGTGCAGCTTTGTTCTCGCAATGCAGGAAAACGACATAGCTGGGCAAAACAAAAGGAAATTGAAGCAATATATACACATCATCAAAAAACTGTAATGGTGGATGCTGCTGCTGGAAATGGCAAAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGACGGYCGATACGATAATCCATACCATCCTCTCTTTAGGACATTGCAYACACTGCATAAGGATGACTATCACAATCCATGTTTCGCGGGTAATACTGGTGGTTGCCTGCGAGAGCCGTGGCATGACTTGCACTCTAAAATTGATGGTCCAGCGGCTTATGATGTTTTGGCAAACTTTGAGGAGAGATGGTTAAGAGCTGCAAAACCTAAAGGGGTTTCAAAGGTAAAAGGTAATGCATATGATGATGCACTGCTTAGATTAGAACGGATTCAAGATTTTTTGACTGTGAATGATGTTCCTAGTGTCGATGACGATAATCCTGAGGCTTGGCATGTTCAGATATTTCGCTCGATTGATTCTAATTCTGTCAAGGGATTTCCAAAGGATCCAAAAATAGCACAAAGCATGGTGAACRCAAGACCTTTTTTGTGTATTTCTTCCTTTTTATGTTTATTTTCAAGTCTAAACTTCCYTCGCCACGAGAATGTTAAGCTTATTGTGGTTTTACAGAACTTGGTATGCAGAAAGAATGTGATGATTGACATGAGCATACATGAAGCATATGTGAAGGCWATCCGTTCAGCACAACATTACATTTATATAGAGAACCAATATTTCATTGGATCCTCATTCAATTGGAGTCAGACTCAATATAAGGATCTTGGTGCTGATAATTTAATTCCAATAGAAATTGCTTTGAAGATTGCTGAAAAGATTAGAGAAAATCAGAGATTRGCSGTGTACATTGTTATTCCAATGTGGCCAGAAGGTATTCCAACAGGGGCTGCCACCCAAAGGATTCTATATTGGCAGAACAAAACAATGCAAAATATGTATCAGACAGTATATAATGCTTTGGTTGAGACMGGACTTGAAACTGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGCAATCGCGAGGCCTGTGGTATATATGAGAATGTTAATGGAACTGGAGCTCCTCCCCCAGCAAATAGTCCACAGGCACAAAGTCGAAATAATGGAAGATTCATGATTTATGTTCATTCAAAGGGTATGATAGTTGATGATGAATATGTGATAATTGGTTCTGCAAACATCAACCAGCGCTCCATGGACGGAGGAAGGGACACAGAGATTGCAATGGGAGCCTACCAACCTCATCATACATGGGCAAGAAACAATTCTGCTCCACGTGGACAGGTCCATGGCTATAGGATGTCACTATGGGCAGAACACACAGGGACAATTGAAGAGTGCTTCTTCCAACCYGAGAGCCTTGAATGTGTCTCAAGGGTTAGAACAATGGGTGAACTGAATTGGAAACAATACTCAGCTAAAGAGGTATCAGAAATGAGAGGCCATCTMATGAAGTACCCTGTAGATGTTGATAGGAAGGGTAAGATTAAACCCATTCCTGGCTTTGAAGAGTTTCCTGATGTTGGAGGCAAGATTGTTGGTTCATGCTTTGGCATTCAGGAGAATCTAACCATTTAG 5586 0.4295 MTSRTLLLFLALMVTNSIAIMDKQTYIVHMDKTKIKSSIHSQDSTKPWFQSVIDFITEVSVQEDEEEIAPQLLYVYETNMFGFSAHLSSKQLEYLNQVDGFLAAMPDELLTLHTTHTPHFLGLQNGRGLWSAPSLASDVIVGILDTGIWPEHISFQDTGLTEVPSRWKGSCEEGTKFSASNCNKKLIGARAFYKGYEKVIGRINETLDYRSPRDSQGHGTHTASTAAGNMVNNASLFGMAKGSASGMRYTSKVAAYKVCWPLGCANSDILAAMDQAVADGVDILSLSLGGIAKPYYNDSIAIASFGATQNGVFVSCSAGNSGPFRSTVGNVAPWIITVAASYTDRSFPTKVKLGNGQVFKGASLYHGKTIQLPLVHANTTGTQRTAQFCTKGSLDPKLVHGKIVACERGMNSRTEKGEVVKMAGGAGMLLLVNQGEELFADSHILPATSLGASASNAIRNYIHSAKSPTASISFIGTMYGDPAPVMAGFSARGPSIVGPDVIKPDVTAPGVNILASWPPLTAPSLLKSDKRRVLYNIVSGTSMSCPHVTGIAALLKSVHKDWSPAAIKSALMTTAYTVNNRGSPLLDIASNTSSAFANPFAFGSGHVNPECASDPGLVYDITNKDYLNYLCSLNYTPTQIAIISKGHFKCSKDTFFQLGDLNYPSFSVSFDINGTNSSVTYKRVVTNVGYPSSSYTVKVEEPNGVSVKVEPRNLRFGKLGEKLNYSNNNGSPSQNRNSRSRSPSDHARAQSPIPHGGSDPHAPSTHHHPAYSFSYPPGPYSXNYYPPPPLSPSSHPSLPHSPCSHRYAYTSLPVSPSPGSSSPGPPINRPPPQLVAFNRPLPRLDYPLSIGGPTTKRRPPPRLDYPLSPGQKSAYSPPHYYTFPYHQGPKSPGVSSQSSQSPISSSPRSPSLENVICNVQISDSKLGAPASPSAPASPPAPAAQTGPFAPHFAHSNSVPFHGRNDEFNGCSDKXSGRRRSTSDVGDLKTSPSVXNESPRNQSLQLASYKGSSLRALLLHGNLDIWIHEANNLPNLDMFHRTLGDMFGKMPGSPGKGNTSDPYVSIRVSSAVIGRTFVIKNCEDPVWEQHFCVPVAHNAAEVIFHVKDSDVVGSELIGVVAIPVEQIHSGEVIKGAYPILNSNGKPVKQGAVLSLTIQYTPIDKLVMYQQGVGAGPEYIGVPGTYFPLRRGGTVTLYQDAHVPDGCLPNLMLDNEMHYVHGKCWFDIFQAISQAQRLIYITGWSVWHKVQLIRDAGPTESLGHLLRSKSQEGVRVLLLVWDDPTSRNILGIQTDGLMATHDEETRKFFKHSSVQVQLCSRNAGKRHSWAKQKEIEAIYTHHQKTVMVDAAAGNGKRKIIAFVGGLDLCDGRYDNPYHPLFRTLHTLHKDDYHNPCFAGNTGGCLREPWHDLHSKIDGPAAYDVLANFEERWLRAAKPKGVSKVKGNAYDDALLRLERIQDFLTVNDVPSVDDDNPEAWHVQIFRSIDSNSVKGFPKDPKIAQSMVNXRPFLCISSFLCLFSSLNFXRHENVKLIVVLQNLVCRKNVMIDMSIHEAYVKAIRSAQHYIYIENQYFIGSSFNWSQTQYKDLGADNLIPIEIALKIAEKIRENQRLAVYIVIPMWPEGIPTGAATQRILYWQNKTMQNMYQTVYNALVETGLETAFSPQDYLNFFCLGNREACGIYENVNGTGAPPPANSPQAQSRNNGRFMIYVHSKGMIVDDEYVIIGSANINQRSMDGGRDTEIAMGAYQPHHTWARNNSAPRGQVHGYRMSLWAEHTGTIEECFFQPESLECVSRVRTMGELNWKQYSAKEVSEMRGHLMKYPVDVDRKGKIKPIPGFEEFPDVGGKIVGSCFGIQENLTI* 1862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2695 1861 Gene3D C2 domain 1016 1150 IPR035892 -
Amo12g2695 1861 SUPERFAMILY Subtilisin-like 112 617 IPR036852 GO:0004252|GO:0006508
Amo12g2695 1861 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1335 1370 IPR001736 GO:0003824
Amo12g2695 1861 ProSiteProfiles C2 domain profile. 998 1136 IPR000008 -
Amo12g2695 1861 Pfam Fibronectin type-III domain 660 726 IPR041469 -
Amo12g2695 1861 PANTHER PHOSPHOLIPASE D ALPHA 1 1537 1861 - -
Amo12g2695 1861 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1707 1734 IPR001736 GO:0003824
Amo12g2695 1861 PANTHER PHOSPHOLIPASE D 1537 1861 IPR015679 -
Amo12g2695 1861 CDD Peptidases_S8_3 110 576 IPR034197 -
Amo12g2695 1861 Gene3D Peptidase S8/S53 domain 138 626 IPR036852 GO:0004252|GO:0006508
Amo12g2695 1861 Gene3D - 344 479 - -
Amo12g2695 1861 Pfam Subtilase family 137 580 IPR000209 GO:0006508|GO:0008236
Amo12g2695 1861 MobiDBLite consensus disorder prediction 889 927 - -
Amo12g2695 1861 Gene3D Endonuclease Chain A 1522 1757 - -
Amo12g2695 1861 CDD PA_subtilisin_like 351 472 - -
Amo12g2695 1861 Gene3D Endonuclease Chain A 1214 1452 - -
Amo12g2695 1861 MobiDBLite consensus disorder prediction 985 1001 - -
Amo12g2695 1861 MobiDBLite consensus disorder prediction 780 796 - -
Amo12g2695 1861 MobiDBLite consensus disorder prediction 722 747 - -
Amo12g2695 1861 PANTHER PHOSPHOLIPASE D ALPHA 1 929 1503 - -
Amo12g2695 1861 PANTHER PHOSPHOLIPASE D 929 1503 IPR015679 -
Amo12g2695 1861 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1018 1161 IPR035892 -
Amo12g2695 1861 ProSiteProfiles Serine proteases, subtilase domain profile. 117 613 - -
Amo12g2695 1861 SMART C2_3c 1021 1135 IPR000008 -
Amo12g2695 1861 MobiDBLite consensus disorder prediction 718 1001 - -
Amo12g2695 1861 Pfam Phospholipase D Active site motif 1708 1734 IPR001736 GO:0003824
Amo12g2695 1861 Pfam Phospholipase D Active site motif 1337 1370 IPR001736 GO:0003824
Amo12g2695 1861 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Amo12g2695 1861 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Amo12g2695 1861 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Amo12g2695 1861 Pfam C2 domain 1020 1138 IPR000008 -
Amo12g2695 1861 CDD C2_plant_PLD 1015 1159 - -
Amo12g2695 1861 Gene3D - 630 748 - -
Amo12g2695 1861 Pfam Peptidase inhibitor I9 25 113 IPR010259 -
Amo12g2695 1861 SMART pld_4 1707 1734 IPR001736 GO:0003824
Amo12g2695 1861 SMART pld_4 1335 1370 IPR001736 GO:0003824
Amo12g2695 1861 MobiDBLite consensus disorder prediction 966 984 - -
Amo12g2695 1861 Pfam Phospholipase D C terminal 1781 1851 IPR024632 -
Amo12g2695 1861 Pfam PA domain 372 457 IPR003137 -
Amo12g2695 1861 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Amo12g2695 1861 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 141 152 IPR023827 -
Amo12g2695 1861 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 113 IPR037045 -
Amo12g2695 1861 SUPERFAMILY Phospholipase D/nuclease 1213 1434 - -
Amo12g2695 1861 SUPERFAMILY Phospholipase D/nuclease 1550 1793 - -
Amo12g2695 1861 MobiDBLite consensus disorder prediction 818 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2695 Amo-Chr12 112207343 112217020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2695 944 1861 Phospholipase D Gene Family (Wang group) AT2G42010 66.176 0.0 1286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2695 K01115 - aip:107626028 1396.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2695 12 112207343 112217020 Amo12g2695 12 112207343 112217020 ECH