LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo12g2694	ATGTTTTCACATAAACTTACCAACTTCTCTTCTCTTCTTTGGCTTCCATTGCTTTTGATCCTACTAAGCAATGCTGAAAACTTTTACATTGTTTTCTTAGGAGATCATCCTCTTATTAGAGACAATGCACATGAGGCACATTTAAATGTTCTATCAACTGTTAAAGAAAGCCACATTGAAGCCAAAGAGTCCTTGGTATATAGCTACACAAAGACCAAGGATGAAGTGCTTTCATTGTTTCCAAATCGGTACCACAAGCTACACACAACAAGATCATGGGACTTCATTGGATTACCTTTGACTGCTAAGAGAAAATTGCAGTCAGAGAGTGACACCATTGTAGGGCTTTTGGACACAGGGGTTACTCCAGAGTTTCAAAGCTTCAAGGACAATGGACTTGGTCCTCCTCCAGCTAAATGGAAAGGAACTTGTGATCACTTTACTAATTTCTCAGGCTGCAATAACAAGCTTATAGGAGCAAGATACTTCAAGCTTGATAAAATGGAAGATCCAGAAGATATATTGTCTCCCATAGATGTTAATGGGCATGGAACTCACACTTCTTCAACAGCAGCAGGAAGTCTTGTCCCTAAAGCAAGTCTCTTGGGCTTGGCCGAAGGCACTGCTCGCGGCGCAGTTCCATCGGCCAGGCTGGCCATTTACAAGGTCTGCTGGCAGAGCAGTGGATGTGCTGACATGGACTTGTTAGCTGCATTTGAAGCAGCTATCCATGATGGTGTGGATGTCATATCAATTTCAATAGGTGGAGGGGACACAAATTATTTGAAGGATTCCATTGCAATTGGAGCATTTCATGCCATGAGGAATGGCATAATAACTGTGGCCTCGGCCGGAAATGATGGCCCGGCTATGGGGACTGTCACGAATACTGCGCCGTGGATTGTGACAGTTGCAGCTAGTGGCATTGATAGGGAGTTCAAAAGTACTATAGAGTTGGGGAATGGAAAGAATGTTTCTGGGGCAGGAGTAACCACTTTTAGTCCAAAACAAAAAGAGTACCCTCTAATCAATGGGGTAGATGCAGCCAAAAACTCTGATAGCAAGGACAGTGCTAGCTTCTGTTTTGAAGACTCTTTAGACCCAAAAAAAGTGAAAGGAAAGATTGTATACTGCAAACAAGGAACTGGTGGAACTGAAGGTGTTATCAAAGGGTATGGAGGAATTGGAACTATACTTGAAAATGAACAATTCCCTGAAGTTGCCCAAATTTTCATGGCTCCTGCTACCATTGTTAATACTACCATAGGTCAAAGTATTACCACTTATATAAAGTCAACAAGATCACCATCAGCAGTGATACTTAAGAGCCATGAAGTAAAAAGACCAGCTCCATTTACTGCTTCATTTTCATCAAGGGGTCCAAATCCAGGTTCCAAAAACATTCTCAAGCCTGATATAGCAGCACCTGGAGTTAACATATTGGCATCTTATACACTAAGGAAATCAATAACTGGTTTGAAAGGAGATACTCAATTCTCAGAATTCACTCTAATGTCAGGAACTTCCATGTCATGCCCTCATGTTGCTGGAGTAGCAGCATATGTCAAGTCTTTTCACCCAGATTGGACTCCTGCTGCTATCAGATCTGCCATTATTACCACAGCTAAACCTATGAGCAAGAGAGTAGACAAGGAAGCCGAATTCGCCTTTGGCGCTGGTCAAATAAACCCAACGAAAGCCGTGAATCCTGGTCTAGTCTATGACATGGATGACCTTGGTTACATCCAATTCCTGTGCCATGAGGGCTACAATGGTTCCAATTTATCAGTACTAGTAGGACACTCTATAAATTGCACCTCTTTGGTACCAGGACATGGCCATGATGCTATCAACTACCCTACAATACAATTCAATGTGAAAAAAGACAAAGAAACAACCCTTGGTGTGTTTAGGAGAAGAGTTACCAATGTTGGTCCTGTTCCAACAAGTTTCAATGCTACCATTACAGCTCCTAAGGGAGTGGAAATTACAGTTAAGCCAAGTAGCCTTGTTTTCTCAAAGGCTATGCAACAAAGGAGCTTCAAGGTTGTGGTGAAAGCAAAAACAATGGCAAGCATGAAAGTTGTGTCTGGCTCTCTTGTTTGGAGAAGTCCACGTTACATTGTTAGGAGCCCTATTGTAATCTATAGTCCTTAA	2157	0.421	MFSHKLTNFSSLLWLPLLLILLSNAENFYIVFLGDHPLIRDNAHEAHLNVLSTVKESHIEAKESLVYSYTKTKDEVLSLFPNRYHKLHTTRSWDFIGLPLTAKRKLQSESDTIVGLLDTGVTPEFQSFKDNGLGPPPAKWKGTCDHFTNFSGCNNKLIGARYFKLDKMEDPEDILSPIDVNGHGTHTSSTAAGSLVPKASLLGLAEGTARGAVPSARLAIYKVCWQSSGCADMDLLAAFEAAIHDGVDVISISIGGGDTNYLKDSIAIGAFHAMRNGIITVASAGNDGPAMGTVTNTAPWIVTVAASGIDREFKSTIELGNGKNVSGAGVTTFSPKQKEYPLINGVDAAKNSDSKDSASFCFEDSLDPKKVKGKIVYCKQGTGGTEGVIKGYGGIGTILENEQFPEVAQIFMAPATIVNTTIGQSITTYIKSTRSPSAVILKSHEVKRPAPFTASFSSRGPNPGSKNILKPDIAAPGVNILASYTLRKSITGLKGDTQFSEFTLMSGTSMSCPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSKRVDKEAEFAFGAGQINPTKAVNPGLVYDMDDLGYIQFLCHEGYNGSNLSVLVGHSINCTSLVPGHGHDAINYPTIQFNVKKDKETTLGVFRRRVTNVGPVPTSFNATITAPKGVEITVKPSSLVFSKAMQQRSFKVVVKAKTMASMKVVSGSLVWRSPRYIVRSPIVIYSP*	719

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo12g2694	718	Pfam	Subtilase family	110	560	IPR000209	GO:0006508\|GO:0008236
	Amo12g2694	718	ProSitePatterns	Serine proteases, subtilase family, serine active site.	507	517	IPR023828	-
	Amo12g2694	718	ProSiteProfiles	Serine proteases, subtilase domain profile.	92	568	-	-
	Amo12g2694	718	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	28	716	IPR045051	-
	Amo12g2694	718	CDD	Peptidases_S8_3	85	542	IPR034197	-
	Amo12g2694	718	PANTHER	SUBTILISIN-LIKE PROTEASE SBT4.14	28	716	-	-
	Amo12g2694	718	SUPERFAMILY	Subtilisin-like	108	572	IPR036852	GO:0004252\|GO:0006508
	Amo12g2694	718	Pfam	Fibronectin type-III domain	617	715	IPR041469	-
	Amo12g2694	718	Gene3D	Peptidase S8/S53 domain	111	578	IPR036852	GO:0004252\|GO:0006508
	Amo12g2694	718	Gene3D	-	310	446	-	-
	Amo12g2694	718	Gene3D	-	585	717	-	-
	Amo12g2694	718	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	22	73	IPR037045	-
	Amo12g2694	718	CDD	PA_subtilisin_like	316	440	-	-
	Amo12g2694	718	PRINTS	Subtilisin serine protease family (S8) signature	109	128	IPR015500	-
	Amo12g2694	718	PRINTS	Subtilisin serine protease family (S8) signature	179	192	IPR015500	-
	Amo12g2694	718	PRINTS	Subtilisin serine protease family (S8) signature	506	522	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo12g2694	Amo-Chr12	112199567	112204052	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo12g2694	24	556	Subtilisin-like Serine Gene Family	AT4G00230	63.158	0.0	706

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo12g2694	-		-	ccaj:109800351	1127.08