Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2679 ATGTCTAATATTTTTATTATCTACCTATACTTTTCTATATATATAGATGTTGATATTAATTGGTTGATTGATTGGACGGAAAATAACTCTATATATATAGAGAAACTCTCACTAATACACACAAGCAAGAAGCTAGCAATAAAAAATAATATTATTGTAGCTAGCGCTAATAGCTCAATGGACTATGTTTCAATGCTTCTTCTATTGTCTTTTGTGTTGGTAAGTATTCATGTCCTAATCTCAAACTTAGTAAAAAAAAAATCACCCAAATCCCTCAAACTTCCACCAGGGCCTAACCCATTTCCAATCATAGGAAACATCTTAGATTTTGGTAATCAACCTCATCAAGCACTTGCTAAACTTTCTCAAACCTATGGACCCATCATGGCTATGAAGCTTGGTAACATAACCACCATAGTTATTTCATCTCCACAATTAGCCAAAGAAGTGCTCCATAAACATGACCAAATCTTCTCCAATAGGACTATCCCAGATTCCGCTACAGCACATGACCACCACAAATTTTCAGTTGTATGGTTGCCACCAACATCTCAATGGAGGAGTCTTAGGAAAGTTTGCGCAACCAAAGTGTTCTCAACACAAAATCTAGACTCGACACAGGTTCTTACTCTTCGTCGAAAGAAGGTTCGTGAATTACTGGATTTTGTGAAGGAAAAAAGTGAAAAGGGAGAAACTTTAGATATTGGTGATGTTTGTTTTACTACCGTGCTTAATTCGATATCAAACACTTTTTTCTCTATGGATTTGGCTCATTACACTTCTCAAAAGTCACAAGAGTTCAAGGATGTTATTTGGGGTGTCATGGAAGAAGTTGGAAGACCTAATGTTGTTGACTTCTTTCCAATGTTTCGGTTGCTTGATCCGCAAGGTGCGCGCGCAAGACAGAAAGTTTACTTTGGGAAGCTACTTAATTTTTTTGATGGTCTTGTAGAAGAAAGATTGCAATCAAGAAGTTTGAGAATGGGGTCTAAGGATTGCAAAGATGTGTTAGATTCTGTGGTAGATCTCATTTTGGAAGGCAATTCTGAAGTTACTAGATCTCATGTGCCACATTTATTTATGGATTTATTTGTGGCTGGAGTAGACACAACATCAAGCACAATAGAGTGGGCAATGACCGAACTAGTCCATAACTCTAAAAAACTAGATAAAGTTAGAGAAGAACTTGAACAAGTCCTTGGCAAAGGTGAACAACAACTTGAAGAATCACACATTTCAAAGCTTCCTTTCCTAAGAGCAATTGTTAAGGAAACTTTACGTTTGCATCCACCTGGTCCATTTTTAGTGCCTCATAGGCCAGAAGATGATGTTGAACTATGTGGCTATATGGTGCCTAAAAATGCACAAATCTTAACAAATGTATGGGCTATGGGGAGAGATTCAAGTGTTTGGACAAACCCAAATGAATTCATGCCTGAAAGGTTCTTGGAAAGTGAAATTGACTTTAAGGGACAAAATTTTGAGCTAATTCCCTTTGGAGCAGGAAGAAGAATTTGCCCTGGATTACCATTAGGATTTAGGAGTATACACTTTGTGTTAGCTTCTCTTTTATTTGAATATGATTGGAAGCTTCCAAATAATGTAAAGCCAGAAGAGATGGATATGTCTGAGAAATATGGATTAACCTTGCACAAGGCACAACCTCTTCAAGTTATTCCTGTTTCCATGCATAACAATATCAAGTGA 1707 0.3691 MSNIFIIYLYFSIYIDVDINWLIDWTENNSIYIEKLSLIHTSKKLAIKNNIIVASANSSMDYVSMLLLLSFVLVSIHVLISNLVKKKSPKSLKLPPGPNPFPIIGNILDFGNQPHQALAKLSQTYGPIMAMKLGNITTIVISSPQLAKEVLHKHDQIFSNRTIPDSATAHDHHKFSVVWLPPTSQWRSLRKVCATKVFSTQNLDSTQVLTLRRKKVRELLDFVKEKSEKGETLDIGDVCFTTVLNSISNTFFSMDLAHYTSQKSQEFKDVIWGVMEEVGRPNVVDFFPMFRLLDPQGARARQKVYFGKLLNFFDGLVEERLQSRSLRMGSKDCKDVLDSVVDLILEGNSEVTRSHVPHLFMDLFVAGVDTTSSTIEWAMTELVHNSKKLDKVREELEQVLGKGEQQLEESHISKLPFLRAIVKETLRLHPPGPFLVPHRPEDDVELCGYMVPKNAQILTNVWAMGRDSSVWTNPNEFMPERFLESEIDFKGQNFELIPFGAGRRICPGLPLGFRSIHFVLASLLFEYDWKLPNNVKPEEMDMSEKYGLTLHKAQPLQVIPVSMHNNIK* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2679 568 PRINTS P450 superfamily signature 497 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS P450 superfamily signature 366 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 SUPERFAMILY Cytochrome P450 95 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 Coils Coil 389 409 - -
Amo12g2679 568 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 499 508 IPR017972 GO:0005506|GO:0016705
Amo12g2679 568 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 60 563 - -
Amo12g2679 568 Pfam Cytochrome P450 95 552 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PANTHER CYTOCHROME P450 FAMILY PROTEIN 60 563 - -
Amo12g2679 568 Gene3D Cytochrome P450 79 564 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS E-class P450 group I signature 146 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS E-class P450 group I signature 496 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS E-class P450 group I signature 375 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS E-class P450 group I signature 355 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS E-class P450 group I signature 419 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS E-class P450 group I signature 506 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS E-class P450 group I signature 460 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2679 568 PRINTS E-class P450 group I signature 122 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2679 Amo-Chr12 111884719 111887833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2679 60 561 Cytochrome P450 AT2G45550 47.638 2.77e-172 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2679 - - gmx:100809483 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2679 12 111884719 111887833 Amo12g2679 12 111884719 111887833 ECH