Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2678 ATGGAGTTTTCATTATCACTTCTTTTAATTTCCATTTTTGTGTTTGCAATTATTCATCTTCTAATCTCCAATTTAGGCATTAAAACACAAAAATCCACCAAACTTCCACCGGGACCAAAACCTTTACCAATCATAGGAAACATCTTAGAACTTGGTAATCAACCTCACCAAGCACTTGCTAAGCTTTCTCAAATCTATGGACCAATAATGACTCTTAAGCTTGGTAACATAACAACCATAGTTATTTCCTCTCCCCAATTAGCCAAAGAAGTACTCCATAAAAATGACCTAATTTCATCTTATAGAGCAGTTCCGGATACTCTTCGTGCACTTGATCACAATCTATATTCGGTTGGATGGATGCAACCTTCAAACGAATGGAGGATTCTTCGGAGAATTTGTGCTACCAAAGTGTTCTCTTCGCAACAACTCGATTCGACACAAGTTCTTAGACAAAGAAAGGTGCAAGAACTCATGGATTTTGTCAAGAAAAGAAGTGAAAAAGGTGAAGCTTTAGATATCGGTGAAGTTGCTTTTATAACCGTGCTTAATTTTGTATCAAACACCTTCTTTTCCATGGATTTGGGTGATTATAATTCTTCTAAGTCTCAAGAATGGAAGAAGAACTTTTGTTCTATCACTGAAGAAGCCGGAACGCCTAATATTGTGGACTTCTTCCCAATCTTTCGGTTGCTTGATCCACAAGGTGCACGTGCAAGAATGACCAAGTATCTTAGAGAGTTGATAGATTTTTTTGATGGTCTTGTCGAAGAAAGGTTGAAATTAAGGGGTCTAGAAATGGAAACTAAGACGTGCAAAGATGTTTTAGATTCCGTGTTACAAGTTATGTTGGAAGAGAATTCTCAAGTGACCCGACTCCATGTGTTGCATCTATTCTTGGTTTTATTAGTGGCTGGAGTAGAAACAACATCAATCACCATAGAATGGGTAATGGCAGAACTATTAAGAAACCCAGAAAAACTTGAAAAGGTTAGAAATGAACTTCAACATGTCATTGGCAAAAATGAACAACTTGAAGAAAAACATATCTCAAAACTTCCATTTCTAAAGGCAGTGGTAAAAGAGACTTTTCGCTTGCACCCACCTGCCCCATTATTAGTACCACACAAATCACAAGAGAATGTTGAACTATGTGGCTTCATTGTGCCTAAAAATGCACAAGTTTGGGTTAATGTATGGGCTATGGGAAGAGATTCAAGTATTTGGACAAACCCTAATGAATTTATGCCTGAAAGATTCTTAGAAAGTGAGATTGATTTTCAAGGCCATGATTTTGAGCTAATTCCATTTGGTGCTGGAAAAAGAATGTGTCCTGGATTGCCATTGGCTTATAGGGCTGTGCACATTTTGTTGGCATCACTTCTTCATTGTTATGATTGGAAGCTACCAAATGAAGATAAGGAAGAGGAGTTGGATATGTCTGAGAATTTCGGACTTACCTTGCGTAAGGCTCAATCTCTCAAAGCTATTCCCATACAATCATAA 1506 0.3752 MEFSLSLLLISIFVFAIIHLLISNLGIKTQKSTKLPPGPKPLPIIGNILELGNQPHQALAKLSQIYGPIMTLKLGNITTIVISSPQLAKEVLHKNDLISSYRAVPDTLRALDHNLYSVGWMQPSNEWRILRRICATKVFSSQQLDSTQVLRQRKVQELMDFVKKRSEKGEALDIGEVAFITVLNFVSNTFFSMDLGDYNSSKSQEWKKNFCSITEEAGTPNIVDFFPIFRLLDPQGARARMTKYLRELIDFFDGLVEERLKLRGLEMETKTCKDVLDSVLQVMLEENSQVTRLHVLHLFLVLLVAGVETTSITIEWVMAELLRNPEKLEKVRNELQHVIGKNEQLEEKHISKLPFLKAVVKETFRLHPPAPLLVPHKSQENVELCGFIVPKNAQVWVNVWAMGRDSSIWTNPNEFMPERFLESEIDFQGHDFELIPFGAGKRMCPGLPLAYRAVHILLASLLHCYDWKLPNEDKEEELDMSENFGLTLRKAQSLKAIPIQS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2678 501 Pfam Cytochrome P450 36 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Amo12g2678 501 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 500 - -
Amo12g2678 501 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 Coils Coil 328 348 - -
Amo12g2678 501 SUPERFAMILY Cytochrome P450 30 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2678 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2678 Amo-Chr12 111852902 111856382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2678 9 500 Cytochrome P450 AT2G45550 46.185 1.92e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2678 - - gmx:100779789 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2678 12 111852902 111856382 Amo12g2678 12 111852902 111856382 ECH