Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2675 ATGGACTATCTATCTCTTCTTCTTTTAGCTTCCCTTGTGTGGATTAGCATTCAAATTCTCATATCCAAAAGATTATTAGGTATCAAAACACCAAGATCACTTAAACTTCCACCAGGGCCTAACCCTTTTCCAATCATAGGAAACATCTTAGAATTGGGTAAGCAACCTCACCAAGCACTTGCTAAGCTTTCTCAAACCTATGGACCAATAATGACTCTTAAGCTTGGTAACATAACAACCATAGTTATTTCCTCTCCACAATTAGCCAAACAAGTACTCCATAAAAATGACCTAATTTTTTCTTATAGAACGGTTCCGGATACTCTTAAAGCACTTGACCACCACATACATTCAGTGGGATGGATGCAACCTTCACCTCTATGGAGGACACTTAGAAAAGTTTGCGCTACCAAAGTTTTTTCTTCGCAACAACTCGACTCCACACAAATTATTCGTCAAAAAAAATTAAAAGAATTGGCGGATTTTGTGAAGGAAAAAAGTGAAAAAGGTGAAATTTTGGATATCAATGAGGCTATTTTTATAACCGTACTTAATTCTATGTCAAACACTTTGTTTTCCATGAATTTGGTTAATTTTGGTGGTTCTAAGTCTCAAGAATTCAAGGAAATAGTTTGTGGTATAACTGAAGAAGCTGCAAAGCCTAATGTTGTGGATTTCTTTCCAATCTTGAGGATACTTGATCCACAAGGTGCACGTGCTAGAATGACCAAACATTTAAGGAAGATACTGAATATATTTGATGGTATTGTTGAAGAAAGATTGCGATTAAGGGATCTAGAAATGGACACCAAGGAATACAAAGATGTGTTAGATTATTTGCTTGAAGTGATGTTGGAAGAAAATTCTCAAATAAGTCGCATCCATGTATTGCATTTACTTTTGGATCTATTTGTGGCTGGACTAGACACAACATCGATTACCATAGAATGGGCAATGGCAGAATTACTACGCAACCCAGAAAAATTGCAAAAATTGAAAGAAGAGCTTGAACATGTTCTTGGCAAGGATGAAAAACAAATTGAAGAATCACATATCTCAAATCTTCCTTTTCTAGAAGCTGTGGTGAAGGAAACTTTTCGCTTTCATACACCAATCCCATTCCTATTGCCACACAAGTCACAAGAGGATGTTGAACTATGTGGCTTTACTGTACCTAAAAATGCACAAGTTTGGGTTAATGTATGGGCAATGGGGAGAGATTCAAGTATTTGGACAAACCCTAATGAATTCATGCCTGAAAGATTTTTGGAGAGTAAGATTGACTTTAAAGGTCAAGATTTTGAGTTAATTCCTTTTGGGGCCGGAAGAAGAATTTGTCCTGGATTACCATTGGCTTATAGGACTATACACATTGTGTTGGGCACTCTTGTTCATGGCTATGATTGGAAGTTAGTTAATGGGCAAAAGGCAAAGGACCTAGATATGTCTGAAAATTTTGGGCTTACCTTGCATAAAGCCCAATCTCTCCAAGCTATTCCCATGAAAACACACCATTGA 1518 0.3696 MDYLSLLLLASLVWISIQILISKRLLGIKTPRSLKLPPGPNPFPIIGNILELGKQPHQALAKLSQTYGPIMTLKLGNITTIVISSPQLAKQVLHKNDLIFSYRTVPDTLKALDHHIHSVGWMQPSPLWRTLRKVCATKVFSSQQLDSTQIIRQKKLKELADFVKEKSEKGEILDINEAIFITVLNSMSNTLFSMNLVNFGGSKSQEFKEIVCGITEEAAKPNVVDFFPILRILDPQGARARMTKHLRKILNIFDGIVEERLRLRDLEMDTKEYKDVLDYLLEVMLEENSQISRIHVLHLLLDLFVAGLDTTSITIEWAMAELLRNPEKLQKLKEELEHVLGKDEKQIEESHISNLPFLEAVVKETFRFHTPIPFLLPHKSQEDVELCGFTVPKNAQVWVNVWAMGRDSSIWTNPNEFMPERFLESKIDFKGQDFELIPFGAGRRICPGLPLAYRTIHIVLGTLVHGYDWKLVNGQKAKDLDMSENFGLTLHKAQSLQAIPMKTHH* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2675 505 Gene3D Cytochrome P450 24 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 Coils Coil 329 349 - -
Amo12g2675 505 Pfam Cytochrome P450 37 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 502 - -
Amo12g2675 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 502 - -
Amo12g2675 505 SUPERFAMILY Cytochrome P450 31 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2675 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2675 Amo-Chr12 111771523 111773845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2675 1 502 Cytochrome P450 AT2G45550 46.169 6.06e-164 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2675 - - gmx:100779789 684.871