Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2674 ATGGAAATACTAATAATATTATTCATCATATCTTTTTTTTCGGCAATAATTCCATTGTTCCTTTTCATATCATCATTCTATAATGGGATCCAAAGTTCTAAAACTTACTATTCCAAGCTTCCACTTCCACCGGGTCCTCACCCCTACCCCATCATTGGGAACATTTTGAAGCTTTTTGGCACCAATAACCCTCTTGAGGCAATCACTCATCTTTCTAAAACTTATGGACCTATAATGACTCTCAAGTTGGCTAGTATAACCACCATTGTCATTTCTTCTCCACAAATAGCCAAAGAAGCACTCCATAAAAATGATGCACTTTTTTCCGGTAGGAAGCTCCCAGTTATTACAACATGGTCACAATCACTTGAGGACTTCTCCAAAACTTCATTGGTATGGATGCCAGCTTCAGCAGCTAAGTGGAGAACCCTTAGAAGAGCTTGTGCCACAAAAATATTCTCCCCTCAGCAACTAGACTCTACACAATGCATCCGCAAGAGAAAGGTTCAAGACTTGCTAAATTATGTTCATGAATGTTGCATCAAAGGTGAAGCTTTTGATATTGGTGAGGCTATCTTTACAACTATCATAAATTCCATGTCAAACACTCTTCTTTCGATGGATTTGGCTCATTATAATTATTTTGATAATAATAAGTTTCATGAGTTTAAGGAGATAATGATTGGTCTTACCAAAGAAACTGGAAGAACTAGTGTTTCAGATTTTCTCCCTTTCCTCCGGTTACTTGATCCACAAGGCACACGTTCAAGTACCAAAATTAATTTCGAAAAGATGCTAGAGTTCCTTAACAGTGTTATTGAAGAAAGAACGCATTCATCAAGTGATGAGTCAAGAATGAACTTTAATGAATGCAATGATGTGTTGGATTCCTTTCTAGATCTTATCAAGCAAGGGAGTTCTGAATTAAACCTCAATGATGTTATATATTTATTCGTGGATTTATTTATTGCGGGAATAGACACAACATCAAGCACACTAGAATGGGCAATGGCTGAGTTGTTACATAATCCAGAAAAAATGTTTAAAGTTAAGGAGGAACTTCATCAAGCACTTGGCAAAAATGGAAAAATTGAAGAGTCTAACATCTCAAAGCTCCCATACCTTAATGCAATTGTGAAAGAAACTTTGAGGCTTCATCCACCGGCACCATTTCTAGTACCCCACAAGGCAATTGATTACGTAGAGTTAGGTGGCTTCACAGTTCCCAAACATGCACAAATCCTAGTTAATGTGTGGTCAATGGGAAGAGATTCAAGCATTTGGGCTAACCCTAATTTATTTGAACCTGAGAGATTCTTGGATAGTGATATTGATTTTAAGGGCAAAAGTTTTGAGTATATCCCATTTGGTGCTGGTAGAAGAATTTGTCCTGGATTGCCTTTTGCATCAAGGTCCATACATTTCATATTGGCATCTCTTTTGTATCACTTTCATTGGAAGTTAGCTGATGAAATGAAGCCACAAGACATGGACATGAATTATACTTTTGGTTTCATTTCTATGAACCAGTGGTGCCTTTAA 1542 0.3716 MEILIILFIISFFSAIIPLFLFISSFYNGIQSSKTYYSKLPLPPGPHPYPIIGNILKLFGTNNPLEAITHLSKTYGPIMTLKLASITTIVISSPQIAKEALHKNDALFSGRKLPVITTWSQSLEDFSKTSLVWMPASAAKWRTLRRACATKIFSPQQLDSTQCIRKRKVQDLLNYVHECCIKGEAFDIGEAIFTTIINSMSNTLLSMDLAHYNYFDNNKFHEFKEIMIGLTKETGRTSVSDFLPFLRLLDPQGTRSSTKINFEKMLEFLNSVIEERTHSSSDESRMNFNECNDVLDSFLDLIKQGSSELNLNDVIYLFVDLFIAGIDTTSSTLEWAMAELLHNPEKMFKVKEELHQALGKNGKIEESNISKLPYLNAIVKETLRLHPPAPFLVPHKAIDYVELGGFTVPKHAQILVNVWSMGRDSSIWANPNLFEPERFLDSDIDFKGKSFEYIPFGAGRRICPGLPFASRSIHFILASLLYHFHWKLADEMKPQDMDMNYTFGFISMNQWCL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2674 513 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 505 - -
Amo12g2674 513 Gene3D Cytochrome P450 30 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 SUPERFAMILY Cytochrome P450 43 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 Pfam Cytochrome P450 43 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2674 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Amo12g2674 513 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2674 Amo-Chr12 111765970 111770177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2674 15 504 Cytochrome P450 AT2G45550 44.289 4.11e-151 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2674 - - adu:107475672 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2674 12 111765970 111770177 Amo12g2674 12 111765970 111770177 ECH