Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2670 ATGGATTACCTTACACTACTACTACTCATCTTATCCTTTATTGTCTCAACCTTTTTCTTCTCCTTCATCCAAACCTCTAAACATTCAAAGCTTCCACCAGGTCCTAAACCATATCCCATCATTGGAAACATCTTAGATCTTCTTAATAGCTCTAATTCTCTTAAATCATTCATCAACCTCTCTAAAACTTATGGACCTATAATTACCCTAAAATTAGGCACCCTTACCTCCATAGTGATTTCTTCTCCACAAATAGCCAAAGAAGCACTCCAAAAAAATGATGTCATCTTATCTAATAGAACAATCCCTTATACCATGTTTTCAACAATTGAGGAACATTGCAACAAGAACTCAATTATATTCTTACCTTCATCAACCAAATGGAGACTCCTTAGAAGAGCTTGTGCAACAAGAATATTCTCACCCCAACAACTTGACTCCACACAAATCCTAAGGAAGAGAAAGTTTCAAGACTTGGTAAATTTTTTGCACCAATGTTGTAAAAAAGGTGAAGCTTTAGATATTGGTGAGGCTATTTTTAAAACAATACTAAATATAATATCAAACACTTTTATTTCTAAGGATTTTGTTCATTATTATGATAATGATGAGAAGTTTAAAGTGTTCAAGGATATAGTGTTTGGTTTGACTGAAGAATCTTCAAGGCCTTGTTTGGGAGATTTTTTCCCTTTATTAGGGTTTCTTGGTTCACATGGTGCACGTGCAAGAACAAAAGATCGCTATGCAACGTTGTATGCAGTTTTTGATGGTGCCATGGAAGAAAGAATTCGTTTGAGGGATTCAAAAATTGATTCTAGAGAGTGCAATGATGCATTGGATTCCCTTTTGGATCTTGTCAATGAAGAGAGTTCTCAATTGAATCGCCATGATGTTGTGTCTTTATTGATGGATTTATTTGTTGCTTCAATAGACACAACATCAAGCACATTAGAATGGGCAATGGCAGAGTTGATACATAGTCCAAAAAAATTGCTTAAAGTTAGAGAAGAACTTGAAGAATCACTTGGCAAAAATGGAGAAGTTGAAGAGTCTCATATCTCAAAGCTGCCATACCTTAATGCAATTGTGAAAGAAACTTTGAGGCTTCATCCACCAGCACCATTTCTAGTACCCCACAAAGCAAATGATGATGTAGAGTTAGGAGGCTTCACTGTTCCCAAAAGTGCACAAATCCTAATTAATGTGTGGTCTATTGGAAGAGACTCAAGGGTTTGGGCTAACCCTAATTCATTTGAACCTGAGAGATTTTTGGATAGTGAAATTGATTTTAAGGGCAAAAATTTTGAGTTGATTCCATTTGGTTCTGGAAGAAGAATTTGCCCTGGATTATCTTTGGCTTCAAGGACCTTGAATTTTATGTTGGCATCACTTTTGTATCACTTTAATTGGAAGGTTGCTAATGAGATGAATCCAGAAGATATAGATATGAGCTATAGTTATGGAATTACCTTGCATAAGGCCCTACCATTATTTCTTGTACCTATCAAAGTTTAG 1515 0.3558 MDYLTLLLLILSFIVSTFFFSFIQTSKHSKLPPGPKPYPIIGNILDLLNSSNSLKSFINLSKTYGPIITLKLGTLTSIVISSPQIAKEALQKNDVILSNRTIPYTMFSTIEEHCNKNSIIFLPSSTKWRLLRRACATRIFSPQQLDSTQILRKRKFQDLVNFLHQCCKKGEALDIGEAIFKTILNIISNTFISKDFVHYYDNDEKFKVFKDIVFGLTEESSRPCLGDFFPLLGFLGSHGARARTKDRYATLYAVFDGAMEERIRLRDSKIDSRECNDALDSLLDLVNEESSQLNRHDVVSLLMDLFVASIDTTSSTLEWAMAELIHSPKKLLKVREELEESLGKNGEVEESHISKLPYLNAIVKETLRLHPPAPFLVPHKANDDVELGGFTVPKSAQILINVWSIGRDSRVWANPNSFEPERFLDSEIDFKGKNFELIPFGSGRRICPGLSLASRTLNFMLASLLYHFNWKVANEMNPEDIDMSYSYGITLHKALPLFLVPIKV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2670 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 502 - -
Amo12g2670 504 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Amo12g2670 504 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 502 - -
Amo12g2670 504 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2670 504 Pfam Cytochrome P450 32 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2670 Amo-Chr12 111663741 111666934 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2670 7 503 Cytochrome P450 AT2G45550 46.535 5.41e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2670 - K20556 adu:107475672 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2670 12 111663741 111666934 Amo12g2670 12 111663741 111666934 ECH