Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2667 ATGGAAGCGACAAAACCCACAGGCAAGAGGTACAGCCGTTTAACGAGCACCTGGGATGGCGGCATAACCGTTTGGCATTGCGTAGGGCGGTCTCAAGGTTGGGATAGCAGGCTAGCTGGGAGGAACCTATATGACGTCATTGGATGCATGTGTGGCACAGACACCGGAATTGCAACACCACCTGCAGTAGAGGCGATGCCGGGAGCCATTGCAGCCATAGAGCTAACACCAGGAGGAGAAGTGCGTTGCCTGAGGTGGCATCGGCCGGAAGGAAGGGAAGGCGGGAGGCACGAAGGGAGGTCTAGCGAAGACCTGAGGCATCACGTAGGAGAAGGTGGGATGGCGCTGCTGCAACGGCAGCAGGGGTGGTGGGGTGGTGTGGAAAGCAGAGGTTACAATGGGAGAGGAGGCGGCATCCGCCATGGAAATGAGGAGAAGAATAAGATTAAGATTGTAAGGCCCGGTTATGTGAATTATGTTTGGAATTCAGTTATTATGGTGGGACCAGCGACGGTGGGAGTACCCACGGAAACATTGTGCGTCGGATTAGGTAAAGGTCACCTCCCTCCGACTCTGACAGTGCAATTTTTATCTGTTGAAGCTCAGCCTCTGGTTCTCATCAAGGTATATGATGCTGATGACGACGATGTGGATTCTCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTAGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAAGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGATAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGTACCGGCCAATCAAACAAGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCTGTGATGATTACCTCATTGGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTGGAGACCCGGCCAAAGATCGCCGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGATATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCAAGTTGGAGCGTTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTACCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGCGGAGCCTCCATGAAAGCAGCGAATCCATTGACATCGCGTTCACGAATGGTGTTTTCAATAAAAATCTCTACTCGTTAACACAGGTGTCTTTTAGTGAACGGCTTCGTGTATCTTGTTTATGGTTTGATGGTTTCCGGGTCAATTCGCACGGTGCAGTGTATACGGTTATAGTGAATAGGCCTTAG 1884 0.4697 MEATKPTGKRYSRLTSTWDGGITVWHCVGRSQGWDSRLAGRNLYDVIGCMCGTDTGIATPPAVEAMPGAIAAIELTPGGEVRCLRWHRPEGREGGRHEGRSSEDLRHHVGEGGMALLQRQQGWWGGVESRGYNGRGGGIRHGNEEKNKIKIVRPGYVNYVWNSVIMVGPATVGVPTETLCVGLGKGHLPPTLTVQFLSVEAQPLVLIKVYDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMKKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRIKLDYGCGRWKVSCFVESHNHDLTPPQFAHLYRPIKQELIADFKSQCSEPVMITSLEVYERSASCYFTRNIFKEIRNEIQRAGALNITVLSTTLDKVEFSVTAGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPCSHIFCAMKFENILEFPDSLIYKRWTKNAKNEFISTDMPVNDDIERVLKFQVGALASNCNKLCDIACKDLADFDEVQSELVNLPFKKGGTRKFTATGMRNRKGKDNTFVERSLHESSESIDIAFTNGVFNKNLYSLTQVSFSERLRVSCLWFDGFRVNSHGAVYTVIVNRP* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2667 627 PANTHER OS03G0181600 PROTEIN 239 355 - -
Amo12g2667 627 PANTHER OS03G0181600 PROTEIN 359 521 - -
Amo12g2667 627 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 359 521 IPR031052 GO:0006355
Amo12g2667 627 Pfam FAR1 DNA-binding domain 256 346 IPR004330 -
Amo12g2667 627 SMART 26again6 443 470 IPR006564 GO:0008270
Amo12g2667 627 ProSiteProfiles Zinc finger SWIM-type profile. 432 468 IPR007527 GO:0008270
Amo12g2667 627 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 239 355 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2667 Amo-Chr12 111632884 111649645 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g2667 FAR1 6.5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2667 - - ahf:112755379 359.377