Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2630 ATGTCCTCTTCTCTTGGTAGCAGCAACAACAGCACAAGCAAAGGTAGTGCTGCTGGTGGTGGTGGTGGTGGCTGCTCAGCCTCTGCTGCAGCACTAACCTCAGAGAACCCTCTTCCTCCTCCTCCAGAAGGATCCATGGAGAAATGTGGCGGTACAAGAATGATGGATGACTGGGAGGGTCAAGATCAGTCCATTCTGAGGTTAATCATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCACAATGTTGATTTCAGTTCGGGAGGGTTTGGTGTTGTGGATCAAGGAGGCTTGATTATGGACCCTTCTGTGCCAGGGAATTATCCTGCTTTCCCATTCCTTGGGGCCGAGAATACGGATGGTCACGTTGCAAAGACCGGTGGGGTTGCTGAACCCATGTTTTCATCCGGTAACAATCCTATGTTAGCCTCCACATCTCCAGCTGCAGGTGTGTTTGGCTCTCAGCAGCCTGTGTTTGGAATTGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAATCATAATCAAGTTCAGTTTTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAACATGTTGTTTACTCTCAGCAACCAGCGAAGCGCCCTCTTTCCGATGCAGCCGTCGGTCACAATTATCAGGTGCCGAGATTACCCCTTTTGGATTCGGGGCAGGAGCAATTTGCTAGGAGGCAGCAGCAGGCCCAGCTTCCTTTGTTTCCTCATCATAGTCAGCAGCAGAAGGTGAGTTCTGCCGGAGACGAGGCGAGCAACCAGCTTCAGCAGGCTATGTTTGACCAGCTTTACAAGACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCGATCGGCAAGCCTTTTCAAAGGGCTGCTCTCTACATGAAGGAGGCATTGCAACTACTGCCCCATTCAAACATCTCCAATTTAACGGCTTTCTCACCTATCAGTTTCATATTCAAAGTTGGAGCTTATAAATCATTTTCAGAGATATCACCGGTTCTCCAGTTTGCAAACTTCACCTCTAATCAAGCCCTCATCGAAGCTGTAGAAAGGTTCGATCGAATTCACATTATTGACTTCGATATTGGGTTTGGAGTGCAGTGGTCTTCTTTTATGCAAGAGCTTGCCTTGAGAAATAGCGGTGCATCTTCTCTTAGAGTTACTGCCGTGGTATCGCCCTCAACCTGCGATGAGGTTGAGCTCAGTTTTACAAGAGAGAATTTAAGTCAATATGCAAAAGACATCAACTTATCATTTGAGCTCCATATCTTGAACATCGAATCATTGAGCTCTCCGTCCTTTCCCCTGGCCGGTCAATTCTTCGATAACGAGGCAGTTGCTGTAAATATGCCACTTTCTTGTTTCACTCATCATCCATCGCTGGTTCCATCGGTCCTTCACTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTGGGCACGAATTGTGACCGAAACGATGTGCCTCTTCCAACCAAGGTAGTCCATGTTCTTCAATATTACTCGGCCTTGCTCGAGTCGCTTGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATTGAGAAGCACTTCATCCAACCATCTATTAGAAAAGTAATCGTGGGTCACCACCATTATCATTCACAAGAAAAGCTACCTCATTGGAGGAACCTCTTTGCTCAATCAGGATTCTCATCGTTCACATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGTGCGCCCGTGCGGGGATTTCAAGTGGATCGAAATCATTCCTCTCTTGTTCTATGCTGGCAGCGAAAAGACCTCGTGTCCATCTCGCTTTGGAGATGCTAA 1926 0.4756 MSSSLGSSNNSTSKGSAAGGGGGGCSASAAALTSENPLPPPPEGSMEKCGGTRMMDDWEGQDQSILRLIMGDVEDPSAGLTKLLQTGSHNVDFSSGGFGVVDQGGLIMDPSVPGNYPAFPFLGAENTDGHVAKTGGVAEPMFSSGNNPMLASTSPAAGVFGSQQPVFGIVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHVVYSQQPAKRPLSDAAVGHNYQVPRLPLLDSGQEQFARRQQQAQLPLFPHHSQQQKVSSAGDEASNQLQQAMFDQLYKTAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLPHSNISNLTAFSPISFIFKVGAYKSFSEISPVLQFANFTSNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSGASSLRVTAVVSPSTCDEVELSFTRENLSQYAKDINLSFELHILNIESLSSPSFPLAGQFFDNEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLGTNCDRNDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRKVIVGHHHYHSQEKLPHWRNLFAQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVDRNHSSLVLCWQRKDLVSISLWRC* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2630 641 Pfam GRAS domain family 283 640 IPR005202 -
Amo12g2630 641 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 640 IPR005202 -
Amo12g2630 641 MobiDBLite consensus disorder prediction 1 17 - -
Amo12g2630 641 MobiDBLite consensus disorder prediction 1 52 - -
Amo12g2630 641 ProSiteProfiles GRAS family profile. 272 640 IPR005202 -
Amo12g2630 641 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 2 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2630 Amo-Chr12 110939321 110942711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2630 283 641 GRAS Transcription Factor Family AT4G00150 52.909 1.54e-121 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo12g2630 GRAS 3.5e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2630 - - aip:107625898 1215.29