Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2624 ATGCTGTTCAAACTCAATATACAACTCTATTATCAGCACGTAAAATTAGGTTTGTTAATAAATATAGAATATTTGCTACATACATGTGTCTTGATACCTGCTCCTTCTTCTTCTTCTAAACAACATCATGACAATGGTGGTGGTCTTCCTCGGTGGCTGCAAGTGCTTCTAACAGAGAAGTTCTACAACGCTTGCATAGTTCATGAAGAAGCAAAGAAGAATGAGAAGAACGTTTATTGCTTGGATTGTTGCATCACTCTCTGCCCTCACTGTTTAGCCCCACATCGCTCTCACAGACTCTTGCAGATTAGAAGGTATGTGTACCACGATGTTATAAGGTTGGATGATGCTGCAAAGTTAATTGACTGCACTTCTGTTCAATCATACACAACGAACAGTGCAAAAGTGGTGTTTATAAAAGAAAGGGCACAGACAAGGAACTTTAGGGGTAATTCCGGCAATTCGTGCAGTACTTGCGACAGAACCCTGCAAGACCCATATCAATTCTGCTCTCTCTCTTTGCAACTATTGCCCTTCAATGAAACCGGGTTTGATGATGGTCAATTGACAACTGACTCGGTTCTTGAACCGGCTGGTTCAGTTTGGACCTCATCCGGTTCAGGTGGATGTGTTGGTGGGGTTGATTGTAAGACCACCCTTGCTTGCACTGCCACCACAGAAATTGTGAGAAAAAAGCGAAGTTCCGGTTCGGCTAGTCGTCCAACCGCACGGTTTGTCGACCGGTTCATGACATTTTGGTTGGTCTTCCGAACCGGAGGAAAGGGACCCCACAGAGGGCCCCTCTTTATTAAGTGA 816 0.4424 MLFKLNIQLYYQHVKLGLLINIEYLLHTCVLIPAPSSSSKQHHDNGGGLPRWLQVLLTEKFYNACIVHEEAKKNEKNVYCLDCCITLCPHCLAPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFIKERAQTRNFRGNSGNSCSTCDRTLQDPYQFCSLSLQLLPFNETGFDDGQLTTDSVLEPAGSVWTSSGSGGCVGGVDCKTTLACTATTEIVRKKRSSGSASRPTARFVDRFMTFWLVFRTGGKGPHRGPLFIK* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2624 271 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 50 174 - -
Amo12g2624 271 PANTHER - 50 174 - -
Amo12g2624 271 ProSiteProfiles Zinc finger B-box type profile. 60 103 IPR000315 GO:0008270
Amo12g2624 271 Pfam PLATZ transcription factor 104 173 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2624 Amo-Chr12 110809320 110813025 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Amo12g2624 PLATZ 9.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2624 - - pvu:PHAVU_008G142900g 321.242