Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2623 TCATTTATATTATTGAAAATGGAGTTACCACCACTTCTAATTTTCTACCTAGCAATAATACCTATGTTTCTATTTCTCATCTTCCAATTCTATAGGACTCTTAAGAATAATCCATCTTTTCCTCCTGGTCCTAGAGGCCTTCCCTTAATAGGAAACCTTCATCAACTAGATAACACCATTCTTCACCTTCAACTATGTCAACTCTTCAAGAAATATGGCCCAATTTTCTCCCTTCAATTAGGATTAAGGCCTGCCATTATCATTTCCTCATCAAAACTTGCCAAAGAGGTACTAAAAAACCATGATCATGAATTTTGTGGAAGACCAAGATTACTTGGCCAACAAAAATTGTCCTATAATGGCTTAGATATTGCATTCTCTTCATGTGGTGATTATTGGAGAGAAGTTAGAAAAATAAGTGTTACACATGTCCTAAGTGCTAGGCGTGTCTCAAGCTTTTCCTCAATAAGACACTTTGAGGTAAAACAAATGTTAAAGAAAATATCCAAACATGCCTCATCTTCTAAAGTAACAAATTTGAATGATGCATTAATGTCTCTCACTAGCACTATCATTTGTAGAAGTGCTTTTGGGAGAAGGTATGATGATGAAGGAGCTGAAAGGAGTAGGTTTCATAGTATGCTAAATAAGTGTGAAGAAATGTTCGCTAGCTTCTTTGTTTCGGATTACATTCCTTTCTTGGGTTGGATTGATAGAATCAATGGATTGAATAAACGTCTTTATGAGAATTTTAAGGAGTTGGATGAGTTCTATCAAGAGGTGATTGATGAACACATGGATCCAAATAGAAAGACTAATCCGGAAGAAGAGGATATGATTGATGTGTTGCTTCAGTTGAAGAAACAACGTTCGTTTTCCATAGACCTTACTTATGATCACATCAAAGCAATTTTCATGGACATGCTTGTAGGAGCAACAGATACAACAGCAGCTACAAGTGTTTGGGCAATGACGGCTCTAATAAAAAATCCAAGAGTGTTGAAGAAATTGACCTATTTCAAGGCAGTAATAAAAGAGACACTAAGGTTGCATTTACCATTGCCATTGCTTCTACCAAGAGAAACCAAAGAAGCTAGCATCATTGATGGATATAAAATTCCATCCAAGACATTAGTGTACATAAATGCATGGGCTATACATAGAGACCCAGAGAAGTGGAAGGATCCAGAAGAGTTTTATCCAGAGAGATTCTTGTTATTGGACAAGAACATAGATGTTGGTGGACAAGATTTTGATTTGATTCCATTTAGTTATGGTCGGAGACAGTGTCCAGGGATGCATATGGCAATTGCGGCATTGGATCTTATACTTGCTAATCTTCTTTATTGCTTTGATTGGGAGTTGCCAGATGGAGTTCAAAAGGAAGATATTGATACTGAAGTCTTACCTGGACTTTTTGGAGGTGTGGTTGTTGAGATGAAAGGCCTTGTTCTTATTTACTCGTATAGGTCTGTTACACATTCAAGTCTTTTTGATAATTAA 1503 0.3646 SFILLKMELPPLLIFYLAIIPMFLFLIFQFYRTLKNNPSFPPGPRGLPLIGNLHQLDNTILHLQLCQLFKKYGPIFSLQLGLRPAIIISSSKLAKEVLKNHDHEFCGRPRLLGQQKLSYNGLDIAFSSCGDYWREVRKISVTHVLSARRVSSFSSIRHFEVKQMLKKISKHASSSKVTNLNDALMSLTSTIICRSAFGRRYDDEGAERSRFHSMLNKCEEMFASFFVSDYIPFLGWIDRINGLNKRLYENFKELDEFYQEVIDEHMDPNRKTNPEEEDMIDVLLQLKKQRSFSIDLTYDHIKAIFMDMLVGATDTTAATSVWAMTALIKNPRVLKKLTYFKAVIKETLRLHLPLPLLLPRETKEASIIDGYKIPSKTLVYINAWAIHRDPEKWKDPEEFYPERFLLLDKNIDVGGQDFDLIPFSYGRRQCPGMHMAIAALDLILANLLYCFDWELPDGVQKEDIDTEVLPGLFGGVVVEMKGLVLIYSYRSVTHSSLFDN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2623 500 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PANTHER CYTOCHROME P450 71B11-RELATED 335 472 - -
Amo12g2623 500 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 337 - -
Amo12g2623 500 Gene3D Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PANTHER CYTOCHROME P450 71B11-RELATED 13 337 - -
Amo12g2623 500 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 335 472 - -
Amo12g2623 500 SUPERFAMILY Cytochrome P450 41 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 Pfam Cytochrome P450 334 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 Pfam Cytochrome P450 41 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Amo12g2623 500 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2623 500 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2623 Amo-Chr12 110747340 110750120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2623 12 472 Cytochrome P450 AT4G31500 44.215 7.56e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2623 - - ccaj:109815551 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2623 12 110747340 110750120 Amo02g2688 02 83644031 83646307 hybridization