Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2622 ATGTCACCACTTATCTTCTATTCCTTACTCTTCCCTTGCCCTTGTTTTTCTTCTTTTTCTTCAAAAACAAGAAACTTAAACAAGAACAAATCACGGGCCAAAATGGTGTCACCACTTATCTTACTTCTGTTCCTAACGCTTCCTTTGCCCTTTCTTTTCTTCCTTTTTCAAAAACAAACACATAACAAGAAAAAAGACTTTCCACCAGGTCCTAGAGGACTTCCAATAATTGGAAATCTTCACCAACTAGATACTACTTCCCTTTATCTTCAACTATTTGAACTCTCAAAGAAATATGGCCCTATATTCTCCCTTCAATTAGGTCTAAGGAAAGCAATTGTTATTTCATCCCCTAAGTTGGCCAAAGAAGCATTGAAAATTCATGACCGTGAATTTGCTGGAAGACCAATCTTAATTAGTCAGCAAAAATTGTCCTACAATGGATTGGAGATATTCTTTTCCCAATATAATGATTATTGGAGAGAGATTAGAAAAACATGTGTTTCTCATCTCCTTAGTGCTAAGCGTGTCTCAAGCTTTTCCTCAATAAGAGAATTTGAGGTCAAGCAATTGATCAAGAAAATATCAAGCCATGCTTCATCAAAAACAGTGACAAATTTGAGTGAGGCATTGATGACTCTATCAAGCACTCTTATATGTAGGATTGCCTTTGGGAGAAGGTATGAAGATGAAGGTGTTGAAAGGAGTAAGTTCCATAGTTTGTTCAATGATTTCCAAGCCATGATGACTACTCTCTTTGTTTCGGATTATATACCTTTCTTGGGTTGGATTGATAGACTCAAAGGACTTCATGCCCGTCTTGATAGAATTTTCAAGGAGTTGGATGAGTTCTACCAAGAAGTTATTGATGAACACATAGATCCTAATAAAGACACTTCAGAGGAAGAGGATATTGTTGATGTCTTGCTTCAATTGAAGAAACAACGTTCGTTTTCCTTTGATCTCACTTATGATCACATCAAAGCAATATTAATGGACATACTTGTAGCAGCAACAGATACAACTGCAGCCACAACAGTTTGGGCTATGACAGCACTCATGAAAAATCCAAGAATAATGAAGAAAGTTCAAGATGAAGTTAGAAACTTTGGAGGTCAAAAAGATTTCTTAGAAGAAGAAGATATTCAAAAGTGTATCTATTTTAAAGCTGTGATGAAAGAAACATTAAGATTATACCTACCAGGACCATTACTTATGCCAAAAGAAACAACTGAAAAGTGCATTATATATGGCTACGAAATTCCAGCTAAGACTATAGTTTATATAAATGCATGGACTATTCATAGAGACTCTGAAGCATGGGAAAATCCAGAAGAGTTTTATCCTGAGAGATTCTTGGGAAGTTCAATTGATTTTAAGGGTCAAGATTTTGAGCTAATTCCATTTGGTGCAGGTCGTAGAATTTGTCCAGGTATGCATATGGCAACTGCATCACTTGACATTATCCTTGCTAATCTTCTTTATTCCTTTGATTGGGAACTTCCTGAAGGGGTTAAAAATGAAGATGTTGATGTTGAAGCTTTGCCAGGGTTGGCTCAACATAAGAAGAATCCTCTTTACCTTATTGCCAAAACTATGAAGGGGTAA 1608 0.3613 MSPLIFYSLLFPCPCFSSFSSKTRNLNKNKSRAKMVSPLILLLFLTLPLPFLFFLFQKQTHNKKKDFPPGPRGLPIIGNLHQLDTTSLYLQLFELSKKYGPIFSLQLGLRKAIVISSPKLAKEALKIHDREFAGRPILISQQKLSYNGLEIFFSQYNDYWREIRKTCVSHLLSAKRVSSFSSIREFEVKQLIKKISSHASSKTVTNLSEALMTLSSTLICRIAFGRRYEDEGVERSKFHSLFNDFQAMMTTLFVSDYIPFLGWIDRLKGLHARLDRIFKELDEFYQEVIDEHIDPNKDTSEEEDIVDVLLQLKKQRSFSFDLTYDHIKAILMDILVAATDTTAATTVWAMTALMKNPRIMKKVQDEVRNFGGQKDFLEEEDIQKCIYFKAVMKETLRLYLPGPLLMPKETTEKCIIYGYEIPAKTIVYINAWTIHRDSEAWENPEEFYPERFLGSSIDFKGQDFELIPFGAGRRICPGMHMATASLDIILANLLYSFDWELPEGVKNEDVDVEALPGLAQHKKNPLYLIAKTMKG* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2622 535 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 Gene3D Cytochrome P450 60 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 39 532 - -
Amo12g2622 535 PRINTS E-class P450 group I signature 120 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Amo12g2622 535 Pfam Cytochrome P450 68 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 SUPERFAMILY Cytochrome P450 68 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2622 535 Coils Coil 360 380 - -
Amo12g2622 535 PANTHER CYTOCHROME P450 71B11-RELATED 39 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2622 Amo-Chr12 110705593 110724199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2622 41 528 Cytochrome P450 AT4G31500 48.473 2.68e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2622 - - gmx:100801312 720.694