Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2621 ATGATTTGGATTGTCGCTTCCTCTAAGATGTTTGAGTCACGAGCCAAAATGGTGTCCCCACTTCTCTTAATTCTATTCCTAACTCTTCCTTTCTCATTGTTTTTCTTCTTCTTTCAAAAACAAAAGAACAAAGCCTTTCCACCAGGTCCTAAAGCCCTTCCAATAATTGGAAACCTTCACCAATTGCATTTTCCTACCCTTCATATTCAACTATGGAAGCTCTCAAAATTATATGGTCCTTTGTTCTCAATCAAACTAGGTTTAAGGCCATGTCTTGTTGTATCCAATTCCAAAATGGCCCAAAAAGTGTTGAAAACTCACGACATTGAATTTTGTGGAAGGCCTTCTTTTCTTGCCCAAAACAAAATTTCCTACAATAGGATTGAAATTGCATTTTCAGCATACAATGATTCTTGGAAAGCAATCAAGAAAATTTGTATTACCCATTTCCTTAATTCAAGTAGTGTCTCCAAATTCTCCTCTATACGCCAATTTGAAGTGAATCAAATGATCAAGGAGATATCAATTCAAGCTTCTTCTAAAAGTGTGACAAATTTGAATGATGCAATTTTGTCACTTACCAACACTATAATTTCTAGAATTGCTTTTGGAAGAAGCTATAAAGATGATAAAGGAATTATTGTTGCTAAGAGGTTACTTGGTTTGCTTAATGAATCTCAAGCTTTGTTAGGAGCATTCTTTGTTTCTGATTATGTTCCATTCATGGGGTGGATTGATAAACTTAGAGGTATGCATTCTCTTCTTGAAAGAAGTTATCAGAAATTTGATGAATTCTTGCAAGAAATTGTCAACCAACACCTTGATCCAAAGAGACAAAAATCTGATGATGAAGAAGAAGAAGATAATGTCATTGATGTCTTATTGAAGCTGAAGAATGATAAGGAGCAGTCATTTCCATCTGATCTCACTTATGATCACATCAAAGCTGTGCTAATGGACATACTTATTGGAGGGACATATTCAAGTGCTGCCACATCAACTTGGGCCATGGCCAATCTAATGAAGAACCCTAAAGCAATGATGAAGGTTCAAGAAGAAGTTAGAAACTTCTTTGGAAGCAAAGGCTTTGTTGATGAAGATGAAATAAGAAATAATAATAATAATGTTCTACCTTATCTTAAGGCAGTGATAAAAGAGACACTTAGATTAGTGCCACCATTACCACTATTATTAACAAGAGAAACAAATGAAGCATGCAAAATAGGAGAATATGAAATTGAAGCCAAGACATTAGTGTATGTTAATGCATGGGCAATTCAAAGGGATCCTGAAATTTGGAAAGACCCAGAAGAGTTTTATCCTGAGAGATTCTTGAAAAGTTCAATTGATTTTAAGGGTCAAGATTTTGAGCTGATTCCATTTGGTTCTGGAAGGAGAATTTGCCCTGGATTGAATATGGGAGTTGCAACGGTGGAGATTATTGTTGCTAATCTTCTTTTTTGGTTTGATTGGGAGATTCCAATTGGGATGGAAGACTTGGATAATAATGAAGTCAAACCAGGGATTGTTCATAGCAAAAAGAATCCTCTTTATCTTAGGGCCAAGAATTATTATCATATGGGAGTAATTAATGAATGA 1599 0.3515 MIWIVASSKMFESRAKMVSPLLLILFLTLPFSLFFFFFQKQKNKAFPPGPKALPIIGNLHQLHFPTLHIQLWKLSKLYGPLFSIKLGLRPCLVVSNSKMAQKVLKTHDIEFCGRPSFLAQNKISYNRIEIAFSAYNDSWKAIKKICITHFLNSSSVSKFSSIRQFEVNQMIKEISIQASSKSVTNLNDAILSLTNTIISRIAFGRSYKDDKGIIVAKRLLGLLNESQALLGAFFVSDYVPFMGWIDKLRGMHSLLERSYQKFDEFLQEIVNQHLDPKRQKSDDEEEEDNVIDVLLKLKNDKEQSFPSDLTYDHIKAVLMDILIGGTYSSAATSTWAMANLMKNPKAMMKVQEEVRNFFGSKGFVDEDEIRNNNNNVLPYLKAVIKETLRLVPPLPLLLTRETNEACKIGEYEIEAKTLVYVNAWAIQRDPEIWKDPEEFYPERFLKSSIDFKGQDFELIPFGSGRRICPGLNMGVATVEIIVANLLFWFDWEIPIGMEDLDNNEVKPGIVHSKKNPLYLRAKNYYHMGVINE* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2621 532 PANTHER CYTOCHROME P450 71B11-RELATED 21 523 - -
Amo12g2621 532 Gene3D Cytochrome P450 38 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 SUPERFAMILY Cytochrome P450 47 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g2621 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Amo12g2621 532 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 21 523 - -
Amo12g2621 532 Pfam Cytochrome P450 47 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2621 Amo-Chr12 110672461 110676934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2621 21 519 Cytochrome P450 AT4G31500 43.056 1.19e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2621 - - gmx:100801312 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2621 12 110672461 110676934 Amo02g2690 02 83666478 83668705 hybridization