Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2620 ATGCTGTTCAAACTCAACGTACAACTCTATTATCAGCACGTAAAATTAGGTTTGTTAATAAATATAGAATATTTGCTACATACATGTGTCTTGATACCTGCTCCTTCTTCTTCTTCTAAACAACATCATGACAATGGTGGTGGTCTTCCTCGGTGGCTGCAAGTGCTTCTAACAGAGAAGTTCTACAACGCTTGCATAGTTCATGAAGAAGCAAAGAAGAATGAGAAGAACGTTTATTGCTTGGATTGTTGCATCACTCTCTGCCCTCACTGTTTAGCCCCACATCGCTCTCACAGACTCTTGCAGATTAGAAGGTATGTGTACCACGATGTTATAAGGTTGGATGATGCTGCAAAGTTAATTGACTGCACTTCTGTTCAATCATACACAACGAACAGTGCAAAAGTGGTGTTTATAAAAGAAAGGGCACAGACAAGGAACTTTAGGGGTAATTCCGGCAATTCGTGCAGTACTTGCGACAGAACCCTGCAAGACCCATATCAATTCTGCTCTCTCTCTTGCAAGATCAACTATCTTATTGGAAGTAGGGGTAGTCTCTCCGGGTACCTATATGAGTGCAACTATTTGCCCTTCAATGAAACCGGGTTTGATGATGGTCAATTGACAACTGACTCGGTTCTTGAACCGGCTGGTTCAGTTTGGACCTCATCCGGTTCAGGTGGATGTGTTGGTGGGGTTGATTGTAAGACCACCCTTGCTTGCACTGCCACCACAGAAATTGTGAGAAAAAAGCGAAGTTCCGGTTCGGCTAGTCGTCCAACCGCACAGGTTTGTCGACCGGTTCATGACATTTTGGTTGGTCTTCCGAACCGGAGGAAAGGGACCCCACAGAGGGCCCCTCTTTATTAA 870 0.4437 MLFKLNVQLYYQHVKLGLLINIEYLLHTCVLIPAPSSSSKQHHDNGGGLPRWLQVLLTEKFYNACIVHEEAKKNEKNVYCLDCCITLCPHCLAPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFIKERAQTRNFRGNSGNSCSTCDRTLQDPYQFCSLSCKINYLIGSRGSLSGYLYECNYLPFNETGFDDGQLTTDSVLEPAGSVWTSSGSGGCVGGVDCKTTLACTATTEIVRKKRSSGSASRPTAQVCRPVHDILVGLPNRRKGTPQRAPLY* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2620 289 PANTHER - 50 289 - -
Amo12g2620 289 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 50 289 - -
Amo12g2620 289 Pfam PLATZ transcription factor 104 176 IPR006734 -
Amo12g2620 289 ProSiteProfiles Zinc finger B-box type profile. 60 103 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2620 Amo-Chr12 110640916 110644785 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Amo12g2620 PLATZ 7.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2620 - - pvu:PHAVU_008G142900g 400.593