Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2614 ATGGAAGCTATTTGCTTAGTGATAACACTTGTATCATTATCCCTTCTTCTTCAAACCTTTGTTAATGGATATTCTTCAAATGATATTAAACATTGGTGTAGCCAAACCCCAAATCCTCAACCCTGTGAGTATTTCTTGAGCAATAACCCTAATCACCAAAACAAACCCATCAACCAAAAATCTGATTTTCTCAAGCTTTCATTGCAACTTGCCCAAGAGAGAGCACTCATAGGACATGCAAACACTGTTTCACTTGGCTCAAAGTGCCGCAACCAACTTGAAAGAGTTGCATGGAATGATTGTGTTGACCTCTATCAGCAAACCATTCAAAAGCTCAACAAAACCCTAGACCCTAACACCAAGTGCTCCCAAGTTGATGCTCAAACATGGCTTAGCACTGCTCTCACAAACCTTGAGACATGCAAAGCTGGCTTCTATGAACTTGGTGTTCAAGATTATGTCCTTCCTCTAATGTCCAACAATGTTACTAAGTTGCTAAGCAACACTTTGGCTCTTAACAACAATGGTGAATCTCATCAAGAACCAAGTTACAAAAATGGATTCCCAACATGGGTCAAGCCAGGTGATAGAAAATTGCTACAAGCATCTTCTCCGGCATCGCAAGCCAATGTAGTGGTGGCCAAAGACGGATCCGGAAAATACACAACAGTTATGGCAGCCGTAAACGCAGCACCAAAGAGTAGCAGTGGAAGGTATGTGATATATGTGAAGGGMGGGATATACAAYGAGCAAGTAGAGATAAAGGCAAATAATATAATGTTGGTGGGAGATGCTGTTACTGGAGATGGATTTATTGCTCAGGGCATGACATTTAGAAACACAGCAGGTGCAGCAAATCATCAAGCTGTTGCATTGCGTTCTGGATCTGACTTATCAGTTTTCTATCAATGCAGTTTCGAAGGTTATCAAGACACATTATATGCTTACTCTGACAGACAATTYTACAGAGAATGTGACATTTATGGCACTGTTGACTTTATCTTTGGTAACGCTGCTGTTGTWTTCCAAAACTGTAACATATATGCAAGAAACCCTCCSAACAAAATCAACACCATCACTGCACATGGCAGAACTGATCCAAACCAAAACACCGGCATTTCCATTCTCAATTGTGTGGTTACAGCTGCATCAGATTTGAAAGCAGTTCAAAGCTCTGTGAAGACATATCTTGGAAGGCCTTGGAAGGAATACTCAAGAACYGTGTTCATGAAGAGTTCTCTTGATAGCTTAATTGATCCAGCAGGTTGGTTGGAATGGAATGGTAACTTTGCATTAACCACATTGTATTATGGAGAGTACATGAACACAGGACTTGGATCTTCAACCGCAAACAGAGTTAAATGGGGAGGTTATCATGTTATTACCAATGCTGCTGAAGCTTCAAAATTCAGTGTTGCAAATTTCATTGCTGGAAACGCATGGCTACCTTCCACACGTGTGCCTTTTACATCCAATCTTTAA 1482 0.4055 MEAICLVITLVSLSLLLQTFVNGYSSNDIKHWCSQTPNPQPCEYFLSNNPNHQNKPINQKSDFLKLSLQLAQERALIGHANTVSLGSKCRNQLERVAWNDCVDLYQQTIQKLNKTLDPNTKCSQVDAQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNNNGESHQEPSYKNGFPTWVKPGDRKLLQASSPASQANVVVAKDGSGKYTTVMAAVNAAPKSSSGRYVIYVKGGIYNEQVEIKANNIMLVGDAVTGDGFIAQGMTFRNTAGAANHQAVALRSGSDLSVFYQCSFEGYQDTLYAYSDRQFYRECDIYGTVDFIFGNAAVVFQNCNIYARNPPNKINTITAHGRTDPNQNTGISILNCVVTAASDLKAVQSSVKTYLGRPWKEYSRTVFMKSSLDSLIDPAGWLEWNGNFALTTLYYGEYMNTGLGSSTANRVKWGGYHVITNAAEASKFSVANFIAGNAWLPSTRVPFTSNL* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2614 493 ProSitePatterns Pectinesterase signature 1. 235 254 IPR018040 -
Amo12g2614 493 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 175 IPR035513 -
Amo12g2614 493 PANTHER PECTINESTERASE 265 491 - -
Amo12g2614 493 CDD PMEI-like_3 32 175 - -
Amo12g2614 493 Pfam Pectinesterase 265 479 IPR000070 GO:0030599|GO:0042545
Amo12g2614 493 SMART PMEI_2 24 172 IPR006501 GO:0004857
Amo12g2614 493 SUPERFAMILY Pectin lyase-like 204 491 IPR011050 -
Amo12g2614 493 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 175 IPR035513 -
Amo12g2614 493 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 175 IPR006501 GO:0004857
Amo12g2614 493 Gene3D - 205 493 IPR012334 -
Amo12g2614 493 PANTHER PECTINESTERASE 265 491 - -
Amo12g2614 493 PANTHER PECTINESTERASE 4 266 - -
Amo12g2614 493 PANTHER PECTINESTERASE 4 266 - -
Amo12g2614 493 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Amo12g2614 493 ProSitePatterns Pectinesterase signature 2. 327 336 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2614 Amo-Chr12 110528582 110530618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2614 7 493 Carbohydrate Esterase AT2G45220 61.328 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2614 K01051 - gmx:100783428 813.913