Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2609 ATGCCAAAGAATTTAAAACTTGGAAGAAGAGACGCAAGAACAGCGAGCCAATCTGCAGCCAACAATGGGATCCCAGCACCAACTTCAACCCTAAATCAACTAATTAATCTCAAGATTTGGTGCTCTTGGACTTTCCACCAAGGACTTGGTGGTCACACAATTGGACAAGCAGGATGTACAATCTTCAGATTCCACATCTACAATGAAACCAACGAGTTAGTAACATCCTTTGCACAAACAAGGCAATCAAAATGCCCTAGGGCATCCGGTGTGGGGGACAACAACCTCACCTTCTTTGATCTTCAAATGCCAGCGTCATTCGACAACCACTACTTCAACAACCTCGTCGACCGGAAAGGTCTCCTCCACTCTGACCAGCAACTCTTCAACGGAGGATCCACTGACTTTATTGTTTGTCGCTACAACACAAACCCTAACTCTTTTTTTGCCGATCTTACCAGTACGATGACCAAGATGGGAGACATAAATTCCCTCACTGGATCCAAGGGAGAGATTAGAAAGAATTGCAGGAGTGTGAATTAA 543 0.4457 MPKNLKLGRRDARTASQSAANNGIPAPTSTLNQLINLKIWCSWTFHQGLGGHTIGQAGCTIFRFHIYNETNELVTSFAQTRQSKCPRASGVGDNNLTFFDLQMPASFDNHYFNNLVDRKGLLHSDQQLFNGGSTDFIVCRYNTNPNSFFADLTSTMTKMGDINSLTGSKGEIRKNCRSVN* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2609 180 MobiDBLite consensus disorder prediction 1 24 - -
Amo12g2609 180 PANTHER PEROXIDASE 72-RELATED 4 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2609 180 Gene3D Peroxidase, domain 2 25 159 - -
Amo12g2609 180 Gene3D - 5 180 - -
Amo12g2609 180 PRINTS Plant peroxidase signature 43 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2609 180 PRINTS Plant peroxidase signature 98 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2609 180 PRINTS Plant peroxidase signature 114 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2609 180 PRINTS Plant peroxidase signature 154 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2609 180 SUPERFAMILY Heme-dependent peroxidases 5 180 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo12g2609 180 ProSiteProfiles Plant heme peroxidase family profile. 1 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2609 180 Pfam Peroxidase 4 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2609 180 PANTHER PEROXIDASE 4 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2609 Amo-Chr12 110459239 110464105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2609 4 180 Peroxidase AT5G05340 59.444 1.14e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2609 K00430 - gmx:100803637 232.646