Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2608 ATGGTGGAGAAAGAATGCCCTGCCGTGGTGTCATGTGCTGATATTCTTGCATTGGCTACTAGAGACTCTGTAGTTTATTTGGGAGGACCATCTTGGGAAGTAGGCTTACGAAGAAGAGATTCTACTACAGCAAGCAGACTTGATGCTAATAACTCCATTCCTACACCCTCCTTCAGTCTAAGTACTCTCAAACAGAATTTCGCTAACCAAGGCCTTTCAGAGAAAGACTTGGTGGCCCTTTCAGCTCAATGCAGACTTTTCGGACCACATATCTACAATGACACCAACATTGATGCCTCTTATGCCAAATTCTTGCAGAGCAAGTGTCCCAGAACTGGAAACGACAAATTGCTCGAACTCCTCCACCGTCAAACTCCCTTCCATTTCGATAACCTGTACTACAAGAATTTAGTTCAGAAGAAGGTTCTTTTTCATTCTGACCAGAAGCTGTACACCGGCGATTCTACCGACCATCTAGTGGGGAAATATGCTACGGATAGAGTTGCAATTTTTTAA 516 0.438 MVEKECPAVVSCADILALATRDSVVYLGGPSWEVGLRRRDSTTASRLDANNSIPTPSFSLSTLKQNFANQGLSEKDLVALSAQCRLFGPHIYNDTNIDASYAKFLQSKCPRTGNDKLLELLHRQTPFHFDNLYYKNLVQKKVLFHSDQKLYTGDSTDHLVGKYATDRVAIF* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2608 171 Gene3D Peroxidase, domain 2 54 167 - -
Amo12g2608 171 ProSiteProfiles Plant heme peroxidase family profile. 1 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PANTHER PEROXIDASE 2 171 - -
Amo12g2608 171 Pfam Peroxidase 2 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 Gene3D - 2 53 - -
Amo12g2608 171 PANTHER PEROXIDASE 72-RELATED 2 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PRINTS Haem peroxidase superfamily signature 28 40 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PRINTS Haem peroxidase superfamily signature 122 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PRINTS Haem peroxidase superfamily signature 10 27 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 SUPERFAMILY Heme-dependent peroxidases 2 168 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PRINTS Plant peroxidase signature 28 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PRINTS Plant peroxidase signature 136 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PRINTS Plant peroxidase signature 120 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PRINTS Plant peroxidase signature 75 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2608 171 PRINTS Plant peroxidase signature 9 19 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2608 Amo-Chr12 110446937 110447783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2608 2 166 Peroxidase AT5G05340 50.000 2.02e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2608 K00430 - gmx:100793973 249.21