Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2602 ATGGAATCTAATAAGAGGAATAGTGTTAATAATAATAGCCAGAACTACCAACAACAACATCAACAAGAACAATTTCAATTTGAAGAGGAACATGAACAGGAACAAGATCAAGAAGAAGCATGTTATGAAGAAGAAGAAGAGGAAGATCAAGATGATGAAAAAAATAATGAGATCCTCAAGAGAAGAATCTCTAATCACCCTCTCTATGGACTCTTGGTTGAAGCTCACTTGGAGTGTTTGAAGGTTGGTGACATATCGAACTTGGACAGACAGCTGAAGATAGATCCAATGCAAGCAATGAAGCAACAAAACTTGAACATGTTCAGCCAATCAGAGCTTGATATCTTCATGGAAGCATATTGCATGGCACTTGGGAAGCTGAAAAAAGCAATGGAGGAACCGCAACAGAAGTCAATGGCTTTCATAAACAACATGCATTCACAACTCAGGGAGCTGACCACCAAGGCCACCGCCATGCCTCCTCCTTCTGAAGCTTCTGGTGCTTCTTCAAGTAGTAGTGACTGCAAGTTCAGAAGAAACCCTAATATCTAG 552 0.404 MESNKRNSVNNNSQNYQQQHQQEQFQFEEEHEQEQDQEEACYEEEEEEDQDDEKNNEILKRRISNHPLYGLLVEAHLECLKVGDISNLDRQLKIDPMQAMKQQNLNMFSQSELDIFMEAYCMALGKLKKAMEEPQQKSMAFINNMHSQLRELTTKATAMPPPSEASGASSSSSDCKFRRNPNI* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2602 183 Pfam KNOX1 domain 59 83 IPR005540 GO:0003677|GO:0005634
Amo12g2602 183 MobiDBLite consensus disorder prediction 29 53 - -
Amo12g2602 183 SMART KNOX2_2 103 154 IPR005541 GO:0003677|GO:0005634
Amo12g2602 183 Pfam KNOX2 domain 110 153 IPR005541 GO:0003677|GO:0005634
Amo12g2602 183 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 38 156 - -
Amo12g2602 183 PANTHER FUSED COMPOUND LEAF 1 38 156 - -
Amo12g2602 183 SMART KNOX1_2 57 97 IPR005540 GO:0003677|GO:0005634
Amo12g2602 183 MobiDBLite consensus disorder prediction 155 183 - -
Amo12g2602 183 MobiDBLite consensus disorder prediction 1 54 - -
Amo12g2602 183 Coils Coil 28 62 - -
Amo12g2602 183 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2602 Amo-Chr12 110212478 110217691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2602 57 152 Homeobox Transcription Factor Family AT4G08150 36.893 4.90e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2602 - - aip:107642073 254.988