Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2585 AAGCTGAAAATAAGCTTTGATGGTTTAAACGATGATGAAGATAGGGAAATATTCCTTGATATAGCTTTTTTCTTTATCGGAATGGACAAAGACGAAGTAATTGATATATTGAATGGCTGTGGATATTCTACTGAAATTGGGATCAGTGTTCTCAGGGAACCATCTCTTGTAACAATTGACTCTAAGAACAAACTTAGAATGCATTATTTGTTGCGAGATATGGGAAGAGAAATCATTCGTGAGAATCTACCTTTACCCGAAGAACGCAGTAGATTATGGAATCCAGAAGAAGTGCTTGATGTCTTATCAAAAGACATGGGAACAAAAGCTATTCAGGGACTTGCTTTGAAGTTGTCAAGGATGAAACCAATTCATTTGAAGACCAATGCTTTTAGGAAGATGAAGAGACTAAGATTGCTTCAACTTGGTGGTGTACAACTCGATGGAGACTTTAAATACCTCTCAACCGATCTTCGATGGTTGTCCTGGCATGGATGTTCTTCAGAATATACAACTATAGGTTTTGATCAAGGAAACTTAGTTGCCATTGACTTCAGATATAGCAATCTCCAGCTAGTATGGAAGAAGAGGCAGGTAAGCCACCTCACCTGA 612 0.3807 KLKISFDGLNDDEDREIFLDIAFFFIGMDKDEVIDILNGCGYSTEIGISVLREPSLVTIDSKNKLRMHYLLRDMGREIIRENLPLPEERSRLWNPEEVLDVLSKDMGTKAIQGLALKLSRMKPIHLKTNAFRKMKRLRLLQLGGVQLDGDFKYLSTDLRWLSWHGCSSEYTTIGFDQGNLVAIDFRYSNLQLVWKKRQVSHLT* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2585 203 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 190 IPR044974 GO:0006952
Amo12g2585 203 SUPERFAMILY "Winged helix" DNA-binding domain 2 102 IPR036390 -
Amo12g2585 203 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2585 Amo-Chr12 109926231 109927196 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2585 11 203 WRKY Transcription Factor Family AT4G12020 37.129 1.27e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2585 - - ahf:112727915 383.259