Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2581 ATGTCAAATGACACGACGAATTTGACTATTAACCCGATACTAAAGATACAAAACGTGGAATCTAGAAAAGTGATATTAGAGGAAAGAATTGGCCAAAAGAAGATACCTGTTGTACTTGATGACGTAGACAAATTGGAGCAACTAAATGCTTTGGCTGCAAATCGTAAATGGTTCTGCCCAGGGAGTGTAATAATCATCACAACAAGAGATCAACGTCTTCTTAATTGGCTTGGAATTGACAAGGTATATAGGCTGGAAAAGTTGAGTGACAGAGAATCTGTTGAACTTTTTAGTTGGCATGCATTTAAGGAACCATTTCCTATTGAAGAATTTGTCGGGTTTACAAGTAAAGTGGTCTCCTATTGTGGGAGATTACCGCTAGCACTTGAGGTTCTTGGATCACATTTGTTTAAAAGGGGAATACAAGAGTGGATAAGTGTTTTGGAGAAACTCAAAAACATTCGCAATGAGCAAATACAAAAGAAGCTGAAAATAAGCTTTGATGGTTTAAACGATGACGAAGATAGGGAAATATTCCTTGATATAGCTTTTTTCTTTATCGGAATGGACAAAGACGAAGTAATTGATATATTGAATGGCTGTGGATATTCTACTGAAATTGGGATCAGTGTTCTCAGGGAACGATCTCTTGTAACAATTGACTCTTAA 669 0.3662 MSNDTTNLTINPILKIQNVESRKVILEERIGQKKIPVVLDDVDKLEQLNALAANRKWFCPGSVIIITTRDQRLLNWLGIDKVYRLEKLSDRESVELFSWHAFKEPFPIEEFVGFTSKVVSYCGRLPLALEVLGSHLFKRGIQEWISVLEKLKNIRNEQIQKKLKISFDGLNDDEDREIFLDIAFFFIGMDKDEVIDILNGCGYSTEIGISVLRERSLVTIDS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2581 222 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 14 221 - -
Amo12g2581 222 Pfam NB-ARC domain 16 162 IPR002182 GO:0043531
Amo12g2581 222 Gene3D - 2 79 IPR027417 -
Amo12g2581 222 PRINTS Disease resistance protein signature 122 136 - -
Amo12g2581 222 PRINTS Disease resistance protein signature 29 43 - -
Amo12g2581 222 Gene3D - 87 171 IPR042197 -
Amo12g2581 222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 182 IPR027417 -
Amo12g2581 222 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 221 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2581 Amo-Chr12 109901196 109902041 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2581 25 220 WRKY Transcription Factor Family AT5G45050 36.869 9.64e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2581 - - ahf:112727915 427.557