Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2552 ATGGTGGTTGAAGATACCCAGAAATCAAGCATCACTGACGACCAAATCACCGCAAACCCTAACAACGAAAACGAAGACCTTGAGGAGGGAGAGATCCTCGACGACGACGACTCCTCCGCCACCTCCAGGCCACCCTCCTCCTCCGGCGCCCTCGCCCGTAACCCCCACCCTCTTGAGAACTCTTGGACCTTCTGGTTCGATAACCCCTCCGCTAAGTCCAAGCAAGCAGCTTGGGGCAGCTCCATCAGACCCATTTACACCTTCGCCACCGTTGAAGAATTCTGGAGCATTTACAATAACATACATCACCCTAGCAAGTTGGCTGTTGGAGCAGACTTTCACTGTTTCAAGCACAAGATTGAGCCTAAATGGGAGGACCCTATCTGCGCTAATGGGGGAAAATGGACTATGACATTTCCTAGGGGGAAATCTGATACCAGTTGGTTATACACGTTGTTGGGGATGATTGGAGAACAATTTGATCATGGTGATGAGATTTGCGGAGCTGTCGTAAATGTCAGGAATAGGCAGGAGAAAATTGCTCTTTGGACTAAGAATGCTGCAAATGAAGCTGCCCAGGTGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTATAATGATACCATCGGCTTTATATTCCACGAGGATGCAAAGAAGCATGACAGAGCCGCTAAAAACAAATACGTCATATGA 696 0.4813 MVVEDTQKSSITDDQITANPNNENEDLEEGEILDDDDSSATSRPPSSSGALARNPHPLENSWTFWFDNPSAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLAVGADFHCFKHKIEPKWEDPICANGGKWTMTFPRGKSDTSWLYTLLGMIGEQFDHGDEICGAVVNVRNRQEKIALWTKNAANEAAQVSIGKQWKEFLDYNDTIGFIFHEDAKKHDRAAKNKYVI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2552 231 Pfam Eukaryotic initiation factor 4E 57 208 IPR001040 GO:0003723|GO:0003743|GO:0006413
Amo12g2552 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 231 IPR001040 GO:0003723|GO:0003743|GO:0006413
Amo12g2552 231 SUPERFAMILY eIF4e-like 52 226 IPR023398 -
Amo12g2552 231 ProSitePatterns Eukaryotic initiation factor 4E signature. 112 135 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Amo12g2552 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 231 - -
Amo12g2552 231 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 231 IPR023398 -
Amo12g2552 231 MobiDBLite consensus disorder prediction 1 23 - -
Amo12g2552 231 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2552 Amo-Chr12 109239468 109241334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2552 1 230 Eukaryotic Initiation Factors Gene Family AT4G18040 63.821 1.37e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2552 K03259 - gmx:100793288 398.667