Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2544 ATGGCGTCGTCGTCATCCCTCTGCGTCGCCCACAGGTGCTTTGTTCTGCTCCGCTCGTCCGACTTGCCTATTGCATCCCTTCGTCCCGCCTTGTCTCATGGCGCCTCGCGGTGCCTTGCCTCAAATCGCCGCTCCTCAAATCTTCCTCCTACTACACTAAGAACGGGAGAAATAGATTTGGGGGCACAATTGGCCTCTATTCCCACTAGCAATCAAGAAACTGAACTCACCATTGACGATGACTTTGATATCTCTGGATTGAAGCCCCTCAAAGTCCCTACCAAGATCTTCTTCAAACATTCTTCCATGGATCCCCACAAAAAGGGTTCTGCAGAAGCTGAGTTTTTCACTAAGTATGGAGAGGCAAGCCGATACCAAATCCACGAAGTCATCGGGAAAGGAAGTTATGGCGTCGTGGGCTCTGCCATTGATACTCATACTGGGGAAAAAGTTGCAATCAAGAAAATCAATGATGTTTTTGAACATGTATCGGATGCTACAAGAATCCTAAGAGAAATTAAGCTCCTGCGCTTGCTTCGCCATCCTGATATAGTAGAAATTAAACATATTATGCTTCCTCCTTCCCGTCGAGAGTTTAAGGATATCTACGTTGTCTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATCAAGGCAAACGATGATCTTACACCTGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATATATACATACAATTCATACTGCCATTGATATCCCTAAAGTAAGCTTCTCTCTACCTTGTGTTGTGCAGTATACCCCTGCAATTGATATCTGGAGCATTGGATGCATATTTGCAGAAATGCTCAATGAAAAGCCATTGTTTCCGGGTAAAAATGTGGTGCACCAATTGGATCTCATGACCGATTTGCTTGGCAGTCCTCCACCTGAGTCCATTGCAAGGGTAGCAGCTAATTATGTAGTAATGGTTCCTTCCGGATAG 978 0.4489 MASSSSLCVAHRCFVLLRSSDLPIASLRPALSHGASRCLASNRRSSNLPPTTLRTGEIDLGAQLASIPTSNQETELTIDDDFDISGLKPLKVPTKIFFKHSSMDPHKKGSAEAEFFTKYGEASRYQIHEVIGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTIHTAIDIPKVSFSLPCVVQYTPAIDIWSIGCIFAEMLNEKPLFPGKNVVHQLDLMTDLLGSPPPESIARVAANYVVMVPSG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2544 325 ProSiteProfiles Protein kinase domain profile. 125 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2544 325 Gene3D Transferase(Phosphotransferase) domain 1 262 317 - -
Amo12g2544 325 ProSitePatterns Protein kinases ATP-binding region signature. 131 155 IPR017441 GO:0005524
Amo12g2544 325 Gene3D Phosphorylase Kinase; domain 1 98 256 - -
Amo12g2544 325 Pfam Protein kinase domain 125 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2544 325 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 82 245 - -
Amo12g2544 325 SUPERFAMILY Protein kinase-like (PK-like) 119 318 IPR011009 -
Amo12g2544 325 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 82 245 - -
Amo12g2544 325 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 263 315 - -
Amo12g2544 325 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 263 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2544 Amo-Chr12 109109067 109110940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2544 75 314 MAP Kinase Gene Family AT1G18150 65.141 2.47e-122 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo12g2544 Pkinase 1.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2544 - - gmx:100795768 380.948