Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2498 ATGGCTGCAAGTATGACAACACTTTCTTGCTTCAAACTAAGAATATGTTTGTCGTTTTGTCTTGTAGGGTTAACACTAGCACAGTTACAACCTAGTACCTTCTATGACAATCGGTGTCCTAAAGCCCTTGTTACCATCAAAGCAGCAGTCAATCTTGCTGTCTTGAAGGAGCGTAGAATGGCTGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCTTCAGTGTTGCTAGATGACACAGCAAATTTCACTGGTGAGCGATCTGCTTTACCGAATAGAAGCTCTCTGAGGGGTTTCAATGTTATAGAGAACATTAAATCCGCACTTGAGTTTATTTGTCCTGGAGTTGTTTCTTGTGCTGACATTCTCGCCGTTGCTGCAAGAGATTCAGTTGTTGCCGTAAATGCTAATAACGACTTACCTGCTCCTTTTTTGGACCTTGGTAACATTATCACTGCTTTTAGTAACAAGGGTTTCACAGTTCAAGATATGGTTGCCTTATCAGGTGCTCACACAATAGGGAAAGCACGTTGTACAAATTTCAGATCAAGGATTTACAACGAAACCAACATAGATCCCTCTTTTGCGAAATCCATGCAAGAAATTTGTCCAATTTCAGGTGGTGGCAACAACTTAGCGTCTTTGGATGTTAGCACTACAATTGATCAATTTGACAACAGATATTTCACAGATTTAGTGAATAAAAAGGGTCTTTTGCATTCGGACCAAGTACTCTTTAATAACGGTTCCACAGATTCACAAGTTCAAAATTATGTGAACAATCCAACTCTCTTCCAAACTGATTTTGCTAAGGCAATGGTTAAGATGGGACAACTTAGCCCACTAATTTCACCCAATGCTCTTGCTACAACATCTTTGTCATCAGCATCATTATTATCACCAAATTACTATGGTCATTCATGCCCTCAGGCTTTGAGCACCATAAGAAGAGTGGTGGAGAATGCTGTTCAAAGAGAGCCACGTATGGGTGCTTCTTTGTTACGCTTGCACTTCCATGATTGCTTTGTTAATGGTTGTGATGGTTCAATTCTTCTAGACCCCACATCCACCATTGATAGTGAAAAAAATGCATCTTCTAATAAAAACTCTGTTCGAGGATTTGAAGTGGTGGACGAAATAAAGGAGGCAGTGGACAAAGCTTGTGGAAAACCAGTTGTTTCTTGCGCTGACATCTTAGCCGTTGCTGCTAGAGATTCTGTTGTTGCGTTAGGAGGACCAAGATGGAAGGTGAGACTTGGTAGAAGAGACTCAACCACAGCAAGCCTTGATGATGCAAACAACAACCTTCCAGCACCATTTTTTAGCATCTCTCAACTCATTTCAAACTTCAAGAACCATGGCCTAAATGAGAAAGACCTTGTGGTTCTCTCCGGTGCCCACACCATCGGTTTTGCACGTTGTTTTTTCTTCAAGGACCATATCTACAACGATACCAACATCAACCCTAAATTTGCAAAGAAGCTCAAGTACATTTGCCCTAGAAAGGGTGGAAACCCTGATATTCTTGCCCCATTGGACACCGCCTCGGCCGCGAGGTTTGACGCCGCCTACTATGGTGACTTGGTTCACAAGAAAGGGGTTTTGCATTCTGATCAAGAATTGTTAAATAGTGACTCCACGGATGGATTGGTCAAGAAATATAGCTATGATGCTGAAGGATTTTATAAGGACTTTGCTAAATCTATGGTTAAGATGGGAAATATAAAGCCACTCACTGGGAATCATGGTGAAATTCGATTGAATTGTAGGAAAGTGAATCAATATCATTAA 1809 0.4118 MAASMTTLSCFKLRICLSFCLVGLTLAQLQPSTFYDNRCPKALVTIKAAVNLAVLKERRMAASLLRLHFHDCFVQGCDASVLLDDTANFTGERSALPNRSSLRGFNVIENIKSALEFICPGVVSCADILAVAARDSVVAVNANNDLPAPFLDLGNIITAFSNKGFTVQDMVALSGAHTIGKARCTNFRSRIYNETNIDPSFAKSMQEICPISGGGNNLASLDVSTTIDQFDNRYFTDLVNKKGLLHSDQVLFNNGSTDSQVQNYVNNPTLFQTDFAKAMVKMGQLSPLISPNALATTSLSSASLLSPNYYGHSCPQALSTIRRVVENAVQREPRMGASLLRLHFHDCFVNGCDGSILLDPTSTIDSEKNASSNKNSVRGFEVVDEIKEAVDKACGKPVVSCADILAVAARDSVVALGGPRWKVRLGRRDSTTASLDDANNNLPAPFFSISQLISNFKNHGLNEKDLVVLSGAHTIGFARCFFFKDHIYNDTNINPKFAKKLKYICPRKGGNPDILAPLDTASAARFDAAYYGDLVHKKGVLHSDQELLNSDSTDGLVKKYSYDAEGFYKDFAKSMVKMGNIKPLTGNHGEIRLNCRKVNQYH* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2498 602 SUPERFAMILY Heme-dependent peroxidases 33 293 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 Gene3D Peroxidase, domain 2 443 578 - -
Amo12g2498 602 Gene3D Peroxidase, domain 2 152 282 - -
Amo12g2498 602 ProSitePatterns Peroxidases proximal heme-ligand signature. 465 475 IPR019793 -
Amo12g2498 602 PANTHER PEROXIDASE 141 290 - -
Amo12g2498 602 PANTHER PEROXIDASE 299 599 - -
Amo12g2498 602 PANTHER PEROXIDASE 26 140 - -
Amo12g2498 602 CDD secretory_peroxidase 28 288 IPR033905 GO:0004601|GO:0042744
Amo12g2498 602 SUPERFAMILY Heme-dependent peroxidases 305 599 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 Gene3D - 308 596 - -
Amo12g2498 602 PRINTS Haem peroxidase superfamily signature 399 416 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Haem peroxidase superfamily signature 465 480 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Haem peroxidase superfamily signature 519 534 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Haem peroxidase superfamily signature 417 429 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Haem peroxidase superfamily signature 336 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 Pfam Peroxidase 322 561 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 Pfam Peroxidase 140 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 314 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 517 532 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 398 408 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 573 586 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 417 432 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 464 476 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 338 358 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 378 391 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PRINTS Plant peroxidase signature 533 550 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 ProSitePatterns Peroxidases active site signature. 336 347 IPR019794 GO:0004601
Amo12g2498 602 ProSiteProfiles Plant heme peroxidase family profile. 304 599 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PANTHER PEROXIDASE 72-RELATED 141 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PANTHER PEROXIDASE 72-RELATED 26 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 PANTHER PEROXIDASE 72-RELATED 299 599 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Amo12g2498 602 CDD secretory_peroxidase 307 598 IPR033905 GO:0004601|GO:0042744
Amo12g2498 602 ProSiteProfiles Plant heme peroxidase family profile. 34 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo12g2498 602 Gene3D - 31 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2498 Amo-Chr12 108248976 108255343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2498 305 599 Peroxidase AT5G05340 58.108 2.55e-118 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2498 K00430 - gmx:100812820 471.47