Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2468 ATGGCGGCATCATTGGTAGGAGGAGCTGCCATAGGAGCTGTGTTTGGAGAACTCTTGAAAGCAGTCATAGATATGAGAGACAGAGCTGTTATGTTCAAACCAACCTTAGCTTACCTCACAACAACGTTAACAGCAATAGATCCTGTGATCAAGGAGATAGAACAACAAAACAATGAACTGGGTCGCGCGAACACCGAGCTAGAGTTGTTGATCAAGGAAATGGAAGAAGGCACAAAGCTTGTTTACAAGTGTTCCAAAATCCACAAGCTGAATTTTCCAGCTAGGATTCGGTACCAAGAACAATTGGTAGCACTGGTGGAGTCTCTGGTGAGGTTCTTTATCATTGATATGCAGGCTCAGACCGCCAGAGATTTGAAAGAGACGCTGATGAAGGTTAGACGAATACATAGCGCGGTTAATAAGATGCAATCGAATAGCAATGATGAAGAAACTGGTGGTGGTGGTATAGTTTCTGAAGATTCTGATTCTGGTTCTGCTAATGTAGCTGTGGAGGCGAATCAGATGGACTTAACTGATGAGACTACTGTCACAATTCAGCAAAATGATGAGTGTGTCACGGAAATAACTAACTCCGTTCCAGTAATAGCTAACTCTGTTCCAGAAACAGCCGTCGAGCCAAAGATCCTTCGGAATAATTCCTTGGAGCAAGTCATGGAAGATCTCTTGCACCTTGTTAGCCAAAATAAGGAAAAAGCAAATAATAGTCAAGAAGAAAAGCATTTGACGACTATCAAATCCTATGATCAATCATATCCAGATAGGAAAAGATTCATGGGTATATGTCTGCCTATAACACCAATTCTAAATAAGATAAGTGGTGGATTTAACCCCTTAGAACCGCCCTCTGTTCATTGCATGTCATGTGATAGTATCATTCAGAAAAATACTACCTCACACACGGAAGATATTGAGACATATTTATATTGTAATCGATGCTATGATGATCATATTCGTCGAAAAATTATTTTTTATGAAGGGTGTCCTCATAAATTTGATATTAAGGAATTGTTGAGAGCTTCTGCTGAAGTTCTTGGAAATACAAGTTATGCAATTACCTGCAAAATCCTCTTGAAAAATGGCGTAACATTAGTTGTAAAGAGATTAAAAGATGTGATGGTAAAGAAGAAAATATTTGAAGAGAAGATAGAGATTGTGCAAAGAATTTCTCAGCACCCAAATGTTCTGTCTCCTCTTGCCTGCTATTATTGTTCCAATGGTGAAAATCTACTGGTTTATGACTACATGACAAAAGGAAGCTTTTTCGAGCTATTGCATGGAACAACCAAAGATAGAGAGAACCCATTAGATTGGGATTCAAGAATGAAGATTTTACTTGGAGTTGCCAAGGGTCTTGCTCATATCCACTCTCTGGATGGAGGAAATTATGTCCATGGCAATATAAGATCATCCAATGTGCTTGTCACAAATGATCACCAAGGTTGCATATCAGATCTTTCAATGACTTATTCATTAAGTATCTCCTTCCCCCAATTTAGAAACACGGGTTACCAAGACAGAGATTTCTGTTTTGGAAGAAAGGAAAAAGTGAACGTACTGACCCAAAAATGTGATGTGTATAGCTTTGGTGTTCTTCTTTTTGAGATGCTAACAGGAAGAGTGCCATCAGAGTATAATGATGCTCTACCATGGGATGTTTACCTTGATGTTAAGGACGGCATTCCTGTGTTTGATAGTGCCATTGGTGATAATATACAGGATGCCTGGAAGATGAAGGAATTGGCAGATGAATGTGCGTCACTAGTACCTAGTAAAAGTCCATCCATGGATGAGGTTGTTAGGAGAATGGAAAAAATAAGAGCATCCTAG 1848 0.3929 MAASLVGGAAIGAVFGELLKAVIDMRDRAVMFKPTLAYLTTTLTAIDPVIKEIEQQNNELGRANTELELLIKEMEEGTKLVYKCSKIHKLNFPARIRYQEQLVALVESLVRFFIIDMQAQTARDLKETLMKVRRIHSAVNKMQSNSNDEETGGGGIVSEDSDSGSANVAVEANQMDLTDETTVTIQQNDECVTEITNSVPVIANSVPETAVEPKILRNNSLEQVMEDLLHLVSQNKEKANNSQEEKHLTTIKSYDQSYPDRKRFMGICLPITPILNKISGGFNPLEPPSVHCMSCDSIIQKNTTSHTEDIETYLYCNRCYDDHIRRKIIFYEGCPHKFDIKELLRASAEVLGNTSYAITCKILLKNGVTLVVKRLKDVMVKKKIFEEKIEIVQRISQHPNVLSPLACYYCSNGENLLVYDYMTKGSFFELLHGTTKDRENPLDWDSRMKILLGVAKGLAHIHSLDGGNYVHGNIRSSNVLVTNDHQGCISDLSMTYSLSISFPQFRNTGYQDRDFCFGRKEKVNVLTQKCDVYSFGVLLFEMLTGRVPSEYNDALPWDVYLDVKDGIPVFDSAIGDNIQDAWKMKELADECASLVPSKSPSMDEVVRRMEKIRAS* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2468 615 MobiDBLite consensus disorder prediction 143 163 - -
Amo12g2468 615 Coils Coil 50 73 - -
Amo12g2468 615 Pfam Protein tyrosine and serine/threonine kinase 354 608 IPR001245 GO:0004672|GO:0006468
Amo12g2468 615 PANTHER OS05G0588300 PROTEIN 322 615 - -
Amo12g2468 615 Gene3D Transferase(Phosphotransferase) domain 1 338 615 - -
Amo12g2468 615 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 135 IPR008808 -
Amo12g2468 615 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Amo12g2468 615 SUPERFAMILY Protein kinase-like (PK-like) 349 609 IPR011009 -
Amo12g2468 615 ProSiteProfiles Protein kinase domain profile. 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2468 615 PANTHER LRR RECEPTOR-LIKE KINASE 322 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2468 Amo-Chr12 107655347 107659092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2468 325 615 Receptor kinase-like Gene Family AT5G58300 42.193 1.64e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo12g2468 PK_Tyr_Ser-Thr 9.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2468 - - ahf:112751694 1208.74