Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2466 ATGGCAACATCACTAGTAGGAGGAGCTGCAGTAGGTGCTGTGTTTGGAGAACTGCTAAAAGCGGTCCTGGCAATGAAAGACAAGGCCATGATGTTCAGACAAACCTTAGCGCACCTGAGAACAACGTTAACAGCAATCGCTCCTGTGGTCAAAGAGATAGAGAACCACAACAATGAATTGGGTCGTCCAAAGGAAGAGCTTGAATCCCTCATGAGAGAAATGGAACAAGGCACCAAGCTCGTCTATAAGTGTTCCAAGATCCGCAAGTTGAATTTCATCGCCAGGATCCGGTACCAAGAACAGCTGGTGGCGTTGGTAGAATCTTTGGTCAAGTTCTTCATGATTGACTTGCAGGCTCAGACAGCCAGAGATTTGAAGGAGACTCTGCTTGAGGTCAGGAAAATAAGCAGTGAAGTGAGTAAATTATCCTCTGCATCACATTTGCGGTGCTCTTCTTCTGGTCGCGTCTCTTTATCCGCTGATTTGGGCCATTTAGAGATACACGAAACAAGTTCGCCGTATTTGGGATCTAATGCTTTGTTGAATCGCCAGAGCGAATCCATTTTCAACACAAACATCAAACCCGAGTCAAGTAGTCCAACTGACTCTGTTACGATAACGTTCCCCGATTTCCAAGGGTCTTCTAGTAATTTCCATATTGATGAGTTGTTAGGTGCTTCGGCTGAGGTTCTTGGGATGACGAGTTATGGAACGTTTGCTTACAAAGCAATATTGGAGGATGGGACGACGCTGGTTGTGAAGAGGCTGAGAAATGTGGTGGTGGGGAAGAGTGAGTTTGATCGGCAGTTGCTGATTTTGCAAAAGCTTTCTAGGCACCCGAATATTATGCCCCTTCTTGCTGGCTATTATTCCAAGGATGAGAAGTTGCTCATTTACGACTACATAGCCAGCTGGAACCTTTCCGATCTGTTGCATGAGAAAAGGAAGAATGGAATGCCACTACTAGATTGGGATTTGAAACTGAAGATTTTACTTGGAGTTGCAAAGGGTGTTGCTCATATCCACTCATCAACTGAAGGAGAATTTGTTCATGGCAACATTAGCACATCCAATATACTTGTCACAGCAGATATTAAAGGTTGCATATCGTATTTTGGTTTGCATTCTATATTCAGTGGCAAATCAAGCAACCTTTTTACACGAAATAAAGGGTATTACGCGCCGGAGGTTATTCGAACTGGAATTCTGACTCAAAAATCTGATGTGTACGGATTTGGTGTTGTTCTTTTTGAGATATTAACTGGAAAATTGTCATCTGAGTATAATAATAATGATCTTCATATCTCATTTAACAATTCGATTCGCGATGACATGCATGGTGGAATGCTAAAGAGGATGATGATACTATCAGAGGCATGCATGGCAATATCACCTGAATTGAGACCTTCCATGGATGAGGTTGTTAAGAAACTGGAAGTAGTCCAAGTTGTTGTGTCATGTATTGTGTATGGTTTGAAGCCTTTTCCATATTGA 1494 0.4264 MATSLVGGAAVGAVFGELLKAVLAMKDKAMMFRQTLAHLRTTLTAIAPVVKEIENHNNELGRPKEELESLMREMEQGTKLVYKCSKIRKLNFIARIRYQEQLVALVESLVKFFMIDLQAQTARDLKETLLEVRKISSEVSKLSSASHLRCSSSGRVSLSADLGHLEIHETSSPYLGSNALLNRQSESIFNTNIKPESSSPTDSVTITFPDFQGSSSNFHIDELLGASAEVLGMTSYGTFAYKAILEDGTTLVVKRLRNVVVGKSEFDRQLLILQKLSRHPNIMPLLAGYYSKDEKLLIYDYIASWNLSDLLHEKRKNGMPLLDWDLKLKILLGVAKGVAHIHSSTEGEFVHGNISTSNILVTADIKGCISYFGLHSIFSGKSSNLFTRNKGYYAPEVIRTGILTQKSDVYGFGVVLFEILTGKLSSEYNNNDLHISFNNSIRDDMHGGMLKRMMILSEACMAISPELRPSMDEVVKKLEVVQVVVSCIVYGLKPFPY* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2466 497 Coils Coil 53 73 - -
Amo12g2466 497 Gene3D Transferase(Phosphotransferase) domain 1 304 487 - -
Amo12g2466 497 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 138 IPR008808 -
Amo12g2466 497 ProSiteProfiles Protein kinase domain profile. 225 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2466 497 PANTHER OS05G0480400 PROTEIN 211 482 - -
Amo12g2466 497 Pfam Protein tyrosine and serine/threonine kinase 231 478 IPR001245 GO:0004672|GO:0006468
Amo12g2466 497 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Amo12g2466 497 PANTHER OS05G0588300 PROTEIN 211 482 - -
Amo12g2466 497 Gene3D Phosphorylase Kinase; domain 1 180 301 - -
Amo12g2466 497 SUPERFAMILY Protein kinase-like (PK-like) 229 487 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2466 Amo-Chr12 107627324 107629202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2466 211 482 Receptor kinase-like Gene Family AT3G08680 43.299 3.89e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo12g2466 PK_Tyr_Ser-Thr 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2466 - - aip:107625872 902.508