Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2462 ATGCTGTGTACCACAGCTGCGAGGGAGTTCAAAGTTGGTGATCACTTTGGTTGGCGTGTTCCTGATCCCACTGACACTTCATTCTACACCCGTTGGGCTGAAAGAAACAGGTTCCAAGTTGGAGATTCTCTCGTGTTTGAGTACGAGAATGACTCGGTTCTAAGTGTGGAGGAATGGGACTACTTTCACTGCGATGCAAGTAACCCCATCACAGCCTTTGACAATGGCAAGAGCATTCTCAATCTTGATAGCCCTGGTGCCTTCTACTTCATCAGTGGAACCGCTCATCATTGTAGCAGAGGACAGAAGCTTCTTGTGGAGGTTATGTCCCCACAACATCATCCAGTTCCAGTTCCAGTTCCAGAATCCCCACCACCCTCTTTGCTTGCACCTCAAGGTATCTCGCTGTCGCCGATGTCTCCTTCGCCTGAAGCCTTCTCCCCAGTAGCTTCATCTCCTTATGATAGCATAGCAGAAGATTCAACCTCTATTATGCTTACGTATTTATAA 510 0.4784 MLCTTAAREFKVGDHFGWRVPDPTDTSFYTRWAERNRFQVGDSLVFEYENDSVLSVEEWDYFHCDASNPITAFDNGKSILNLDSPGAFYFISGTAHHCSRGQKLLVEVMSPQHHPVPVPVPESPPPSLLAPQGISLSPMSPSPEAFSPVASSPYDSIAEDSTSIMLTYL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2462 169 Pfam Plastocyanin-like domain 25 102 IPR003245 GO:0009055
Amo12g2462 169 PANTHER BLUE COPPER PROTEIN 4 117 IPR039391 GO:0009055
Amo12g2462 169 SUPERFAMILY Cupredoxins 7 109 IPR008972 -
Amo12g2462 169 Gene3D - 7 117 IPR008972 -
Amo12g2462 169 PANTHER EARLY NODULIN-LIKE PROTEIN 2 4 117 - -
Amo12g2462 169 CDD OsENODL1_like 8 109 IPR041846 -
Amo12g2462 169 ProSiteProfiles Phytocyanin domain profile. 8 110 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2462 Amo-Chr12 107538951 107539917 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2462 1 126 Phytocyanin Superfamily AT1G79800 51.825 9.55e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2462 - - adu:107461559 311.997