Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2437 ATGACACCGTCTACGCTTCTCTATTTTCTCTTACTAATCTTCCCTTCCGCGCTTTCTCTCTCCTCCGACGGCCTCGCGCTTCTCTCTCTAAAATCTGCCGTCGACGGCGGTGCAGTCACATTCTCCGATTGGAACGACGGCGATACCACGCCGTGCCGGTGGTCTGGTATCGCATGTTCGAGCATCTCCGGCGAGCCTGAGCCTCGCGTCGTCGGCATCGCGCTTGCCGGGAAATCACTCCGGGGATACATTCCATCGGAGCTTGGGACATTAAGGTACCTCCGGCGACTCAATTTGCACGACAATGAATTCTACGGCGTCGTTCCGGTGCAGCTCTTCAACGCCACCGCGCTTCACAGCTTGTACCTCCACCGGAACAACCTCTCCGGTCCATTCCCTCCGTCGCTCTGCACACTTCGCCGCCTCGAGAACCTCGATTTCTCCCAGAATTCGTTCTCCGGCCACCTGCCGCCGGAGCTCAAGGACTGCAAGCAGCTTCAGAGACTGATTCTGGCGAGGAATAATTTTTCCGGCGATATTCCGGCCAATGTGTGGTCGGGGATGGATGAGCTCGTCCAGCTCGATCTCTCCGATAATCAATTCGAAGGTCCGATCCCTGACGAACTCGGCGATTTGAGTTCTCTCTCTGGCACACTAAACCTCTCGTTCAATCACTTATCCGGTAAGGTTCCGGCGTTGCTTGGGAAGTTACCGGCGACCGTGAGCTTCGATCTCCGGAACAACAATCTAACCGGCGAGATTCCCCAAACAGGCTCATTTTCAAATCAGGGCCCCACTGCGTTCCTTGGGAATCCAAACCTTTGCGGATTTCCATTAAGAAAATCATGCAACGGTTCGGATTCAGGCCGGGGATCACAGGAAGGTCCCGACGCGGCAGCACATGCGGGGACCTTCCATTCAGAAAAAGGCCTGAGTCCCGGCCTCATAATCCTGATCTCAGCAGCCGACGCTGCTGGGGTCGCCCTCATCGGGCTAGTAATCGTATATGTTTATTGGAAGAGGAAGGATGATGGCAATGCCTGTAGCTGTGCAGGGAAGAGCAAATTTGGCGGCAGCGGCGGTGGCGAGGAGAAGATGAATCTGTGTGCATTGCAATGTATGAATGGAGTGAAGAGCGACGAGGAGGAGGAGGAAGAGGAAGAGGAAGCGGGGGAAGGTGGAAGAGTTGAAGGGGGTTTGGTGAACATAGACAAAGGGTTTAGGTTTGAGCTTGATGAGCTTCTAAGGGCATCGGCATATGTGTTGGGGAAGAGTGGGTTGGGGATAGTGTACAAGGTGGTGCTTGCTAATGGTGTTCCTGTGGCGGTGAGGAGATTGGGAGAGGGTGGTGATCAGAGGTATAAGGAGTTTGCTGCTGAGGTTCATGCCATTGGGAAGGTTAGGCACCCTAACATTGTGAGATTGAGGGCTTATTATTGGGCACATGATGAGAAGCTTCTCATTAGTGATTTCATCTCTAATGGCAATTTGGCTCAAGCACTTCGAGGGAGAAGTGGACAACCATCTCCAAACCTTTCTTGGTCAACAAGGCTTAGAATAGCCAAAGGAGCAGCAAGAGGCATGTCCTATCTCCATGAATGCAGTCCAAGAAAGTTTGTCCATGGTGATATCAAACCTTCCAACATCCTACTTGACAATGACTACCAACCATACATATCCGATTTCGGGCTCAACCGGCTAATCAGCATCACCGGCAACACCCCGTCGACTGGTGGCCTAATGGGTGGTGCTCTTCCATACATGAACTCATCACAGAAAGAGAAGACCAACAATTACAAGGCGCCCGAGGCACGCTTCCCCAGCTCCAGACCAACACAGAAATGGGATGTGTATTCATTTGGGATTGTTCTGCTTGAATTGCTAACTGGCAGGACGCCGGAATCTTCTCCGACAACTTCAACTTCTTCTGTGGAAGTTCCTGATTTGGTGAGGTGGGTAAGGAAAGGCTTTGAACAAGAGAGTCCCTTATCTGAAATGGTTGATCCATCATTGCTACAAGAAGTGCGTGTAAAGAAAGAAGTGTTGGCTGTTTTTCATGTAGCATTAGCATGCACTGAAGGTGACCCCGAAGTTAGGCCTAGAATGAAAACTGTCTCTGAAAATCTTGAAAGGATTGGATCATAG 2145 0.5142 MTPSTLLYFLLLIFPSALSLSSDGLALLSLKSAVDGGAVTFSDWNDGDTTPCRWSGIACSSISGEPEPRVVGIALAGKSLRGYIPSELGTLRYLRRLNLHDNEFYGVVPVQLFNATALHSLYLHRNNLSGPFPPSLCTLRRLENLDFSQNSFSGHLPPELKDCKQLQRLILARNNFSGDIPANVWSGMDELVQLDLSDNQFEGPIPDELGDLSSLSGTLNLSFNHLSGKVPALLGKLPATVSFDLRNNNLTGEIPQTGSFSNQGPTAFLGNPNLCGFPLRKSCNGSDSGRGSQEGPDAAAHAGTFHSEKGLSPGLIILISAADAAGVALIGLVIVYVYWKRKDDGNACSCAGKSKFGGSGGGEEKMNLCALQCMNGVKSDEEEEEEEEEAGEGGRVEGGLVNIDKGFRFELDELLRASAYVLGKSGLGIVYKVVLANGVPVAVRRLGEGGDQRYKEFAAEVHAIGKVRHPNIVRLRAYYWAHDEKLLISDFISNGNLAQALRGRSGQPSPNLSWSTRLRIAKGAARGMSYLHECSPRKFVHGDIKPSNILLDNDYQPYISDFGLNRLISITGNTPSTGGLMGGALPYMNSSQKEKTNNYKAPEARFPSSRPTQKWDVYSFGIVLLELLTGRTPESSPTTSTSSVEVPDLVRWVRKGFEQESPLSEMVDPSLLQEVRVKKEVLAVFHVALACTEGDPEVRPRMKTVSENLERIGS* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2437 714 SUPERFAMILY L domain-like 21 280 - -
Amo12g2437 714 ProSiteProfiles Protein kinase domain profile. 416 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2437 714 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 17 713 - -
Amo12g2437 714 Gene3D Phosphorylase Kinase; domain 1 407 491 - -
Amo12g2437 714 Pfam Protein kinase domain 421 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2437 714 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Amo12g2437 714 SUPERFAMILY Protein kinase-like (PK-like) 421 709 IPR011009 -
Amo12g2437 714 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 713 - -
Amo12g2437 714 CDD STKc_IRAK 422 712 - -
Amo12g2437 714 SMART serkin_6 420 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g2437 714 Gene3D Ribonuclease Inhibitor 20 185 IPR032675 -
Amo12g2437 714 Gene3D Ribonuclease Inhibitor 186 285 IPR032675 -
Amo12g2437 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Amo12g2437 714 Gene3D Transferase(Phosphotransferase) domain 1 492 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2437 Amo-Chr12 107025438 107029750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2437 17 712 Receptor kinase-like Gene Family AT1G67510 66.104 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo12g2437 Pkinase 8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2437 - - gmx:100793996 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g1824 04 84834380 84839665 Amo12g2437 12 107025438 107029750 PCT