Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2424 ATGTTATGGTTTGGGCGCATTCGGTACAGTAGCAGATTCAGTCACTACTGCGTCATTCCAGGCACTCAGCCTCATTCTAGGTCCGCGACATTCACCGCCGTGCGGGTGGCTATCGACGTTGAAGCCGCCTTCGATCTGAGACAGTGCTGCCGATTTGAGATGGAAAGCTATGGAGAAGGAAGTTCGGATTTCTCCGTCCAATGGACTGATGGATGGAGCATGGACTCAACGGATGATGACGAAGGAAGTGCTGCACGGTCACCAGAGATAGAGGAAGGTCAATCGGCAGCGAGGGATAGAGAAGATGGTTCAGTGGCTGGTGATGAGGGTTCCATGCTGGTACCAACAGGAATACACGTTGTGGCTGACAATCCATATAGTGACGAAGAATTGGGATCAGCGGTTTTAACTGCCGCCGCATTGGAATCAGCTGAGTATAATAGTGTGGAAGAGGCGTACAAAGCATATGTGGCTTTTGCGAATGCGACTGGATTTGCTGTACGAAAGGGTGATTCTGTGAAAAATGAGGAAGAGAATATCGTGCAGAAGTTCTTTTATTGCAATCGACAAAGTTTGCATGAGAAGAAGCACTATGAGAGGGTCGATAGGAAGAGGGCTCATAAAGCAGAGACCAGAACCAATTGTTATGCCAAGTATGTTGTATACTTGGACATGAGTTCTAGAAAGTGGAGGACAAAAACGTTAATTGTGGATCATAATCACGATTTGGCCCCACCGGATTTCACCAACGTAATGGCGCCGCATCGGAAGCTGACTGATGGAGACAAAGCTCACATACACAGCGTGCATGAGGCTGGATTCCAGACAACTCAAATCATAGGAAGAAAATATATGACATAA 861 0.4727 MLWFGRIRYSSRFSHYCVIPGTQPHSRSATFTAVRVAIDVEAAFDLRQCCRFEMESYGEGSSDFSVQWTDGWSMDSTDDDEGSAARSPEIEEGQSAARDREDGSVAGDEGSMLVPTGIHVVADNPYSDEELGSAVLTAAALESAEYNSVEEAYKAYVAFANATGFAVRKGDSVKNEEENIVQKFFYCNRQSLHEKKHYERVDRKRAHKAETRTNCYAKYVVYLDMSSRKWRTKTLIVDHNHDLAPPDFTNVMAPHRKLTDGDKAHIHSVHEAGFQTTQIIGRKYMT* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2424 286 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 144 252 - -
Amo12g2424 286 Pfam FAR1 DNA-binding domain 156 244 IPR004330 -
Amo12g2424 286 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 144 252 - -
Amo12g2424 286 MobiDBLite consensus disorder prediction 68 111 - -
Amo12g2424 286 MobiDBLite consensus disorder prediction 79 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2424 Amo-Chr12 106761897 106764605 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g2424 FAR1 3.7e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2424 - - ahf:112730459 531.946