Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo12g2391 | ATGCGAGCATTGAACGTGACAATGGAAGAAGTATGTGATGCACTTTATGAAGGAAATGAGTTGCCTGCTGAGTTCCTCCAAACCTTGCTGAAGATGGCACCGACGACTGATGAACAACTTAAGCTTAGACTTTTTACTGGTGAGCTATCTCAACTTGGCCCTGCTGATCAGTTCTTGAAAGCAATGGTTGACATGCCATTTGCTTTTAAGCGAATGGAAGCACTTCTTTTCATGAGTACACTTAAAGAGGAGCTCAATTCTACTATCGAGTCTTTTGCAGTTCTAGAGGCTGGCAAAAGTAACAGAAGATCTCAAAGCAGTCTACAGATGCACAATCTCAGCATGCACCAAGATCCGACACTGAATGTGAACTTCCTCGGGAGGATAGTGCTGGCTATTCCTTGA | 405 | 0.437 | MRALNVTMEEVCDALYEGNELPAEFLQTLLKMAPTTDEQLKLRLFTGELSQLGPADQFLKAMVDMPFAFKRMEALLFMSTLKEELNSTIESFAVLEAGKSNRRSQSSLQMHNLSMHQDPTLNVNFLGRIVLAIP* | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo12g2391 | 134 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1 | 134 | IPR015425 | - | |
| Amo12g2391 | 134 | PANTHER | FORMIN-RELATED | 1 | 104 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
| Amo12g2391 | 134 | PANTHER | FORMIN-LIKE PROTEIN | 1 | 104 | - | - | |
| Amo12g2391 | 134 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 2 | 98 | - | - | |
| Amo12g2391 | 134 | Gene3D | Formin, FH2 domain | 1 | 110 | IPR042201 | - | |
| Amo12g2391 | 134 | Pfam | Formin Homology 2 Domain | 1 | 101 | IPR015425 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo12g2391 | Amo-Chr12 | 106220204 | 106223067 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo12g2391 | 1 | 96 | FH2 protein (formin) Gene Family | AT5G54650 | 70.833 | 1.12e-40 | 142 |