Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2373 ATGAGTGGTGGGTATGCTGACATGAAGCAGAAAACTAAAGACGAACATGCTCTCTCAAAAGTGGAAGGCCCAGAAGATTCTGCATTGCTTTGCATTAGCGCGGCTCTCTTTTCTGAATCCCTCTTGCACTGCAAGATCTCACTTCACGTAGTCATGGTCTTCCCCGCAGTCACAGTCGCAATCGCCCTCTATGCAGTTTGTAGCTACCATCATCCTCCGCGCAGTTCCCACCTGCTCACATATATGTTGAAGGGTATCATTGATGGTGTGGAGTATTATGGGAGTGGAGAGACAAAGAAAGTATCATGGAAAGAATCACAACTCAAATGGTTGCGTCGTTTCCTCATTGAAAAAGAAGAAGATATTTTGAAGGCCTTAATGCTCGACTTAGGAAAGCATCAAGTTGAAGCTTTTAGAGATGAGATAGAAACTTTGATGAAGTCCTTGAATTTTGCATTGAGTAATTTAAATCAAATCTCCACCCCTTAA 489 0.4274 MSGGYADMKQKTKDEHALSKVEGPEDSALLCISAALFSESLLHCKISLHVVMVFPAVTVAIALYAVCSYHHPPRSSHLLTYMLKGIIDGVEYYGSGETKKVSWKESQLKWLRRFLIEKEEDILKALMLDLGKHQVEAFRDEIETLMKSLNFALSNLNQISTP* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2373 162 PANTHER ALDEHYDE DEHYDROGENASE 88 157 - -
Amo12g2373 162 PANTHER ALDEHYDE DEHYDROGENASE 88 157 IPR012394 GO:0006081
Amo12g2373 162 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 93 160 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2373 Amo-Chr12 105768166 105769559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2373 91 162 Aldehyde Dehydrogenase Gene Family AT4G36250 33.333 1.92e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2373 K00128 - adu:107473194 128.257