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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Amo12g2345
ATGGATTGCATTGATCCAAGTGGTAACACCATCACATGTGCATCAATAGAAGAACAAGGCTCATCTTCAAACCCAAACAACAAGAGGAAGAAAGGTAATGCTATGAACAACAATAAGAYGAAGAACAAGGGAGTGATGAAACTCTCAACTGACCCACAAAGTGTGGCAGCAAGAGAAAGAAGGCACAGAATCAGTGACAGGTTCAAGATCCTTCAGAGCATGGTCCCTGGTGGCAGCAAGATGGACACTGTTTCTATGTTGGAAGAAGCCATTCACTATGTTAAGTTCCTCAAGGCTCAGATTTGGCTTCACCAAACTTTGATGATGAACTATGATCATTTTTAA
345
0.4145
MDCIDPSGNTITCASIEEQGSSSNPNNKRKKGNAMNNNKXKNKGVMKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKAQIWLHQTLMMNYDHF*
115
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Amo12g2345
114
PANTHER
TRANSCRIPTION FACTOR LAX PANICLE 1
28
110
-
-
Amo12g2345
114
MobiDBLite
consensus disorder prediction
1
52
-
-
Amo12g2345
114
CDD
bHLH_AtIND_like
49
109
-
-
Amo12g2345
114
PANTHER
TRANSCRIPTION FACTOR HEC3-RELATED
28
110
IPR045843
GO:0003700|GO:0006355
Amo12g2345
114
Pfam
Helix-loop-helix DNA-binding domain
58
97
IPR011598
GO:0046983
Amo12g2345
114
Gene3D
-
52
106
IPR036638
GO:0046983
Amo12g2345
114
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
53
108
IPR036638
GO:0046983
Amo12g2345
114
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
48
97
IPR011598
GO:0046983
Amo12g2345
114
MobiDBLite
consensus disorder prediction
8
49
-
-
Amo12g2345
114
SMART
finulus
54
103
IPR011598
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Amo12g2345
Amo-Chr12
105421436
105423275
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Amo12g2345
39
113
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT3G21330
56.000
9.20e-23
89.0
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Amo12g2345
HLH
2.5e-08
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Amo12g2345
-
-
adu:107475363
201.06
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Amo12g2345
12
105421436
105423275
Amo12g2345
12
105421436
105423275
ECH
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