Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2301 ATGGCAAAACATGAAAAACCACAACCTGGGTGTTTCTCTGGATTCTTGCGTGTGATCCTATGTGCTGGAACTGGAACTAGTCCTCCAGTTCATCCATCTCAAGATGAATCAGAAAATGTGGATTCAATTTCAAACAAAAGAGATGCATTGATCCATGAAGATTTTGCTGCTACCCCWGGATTGGTGGCAAGYCTAATGGGGTTGGATTCTGTTCCCAACACCAACTGTTTGATGAAAGGACACTCCCCAGATTCAGTTCCAAGGAGTAGGTCAGTGAATTTTGTGGACTACTTGCTAAATTTCGAAGTAGGCCAAGAAAATTTCCATCGCCGGGCGAAGACTTCYGCCTCGTTTCGRGAGGTTCCGGCATCTGCATTGGCTTATAGRCAGCAAAAACAAGATCATGATCTTGTTGTGTTTCATAARTGGGATTACAATGTGGTTAAGGATCATGAAGCTCGACGCGAGTCGAGGAAATTTGAAGTAGGGTTGATGAAAGAATCAAAGCAGGGGAAGAAACAGAGCAAAGAAACAGGGGAAAGGAATCAAAGGAAGAACAAGAAGATTTCAAAGTTGAAGAATGAACCTAGAAGGGTTCCTTCTAACTCTAATATGAATGGTAGAAAGGTTAGAAAGCAAAGTGAAGATAAAGATTGTTCTAGTGTCTCTTCATGTTCTTCAAAGAGTTATGGTTATAGATATAGTAGTAGTGGTGGTAATGGTGATTGTGATTCAAGCACAGGTTCTTGTTCTCCATTATTGCAAAGCAAGTATAAGAAAGAGTTTGTTGAATCAAATCTCAAAAACAAGATGAGAAAGAAGAAATCACCAAAGAAGATAGAGAGTGATTGTGTCTCAGAAAATCTCAGTCCAATTTCAGTTCTTGATGTCAATGATTCTCCTTCCCTCTATGGAACAACTTCTCTAGATGCTACACAACCCTTGCCTTCAAACTCAAAGTGGAAATCTTCACCACTGAGATCATCAAGCGATGGAATTGAAGCCACAAGAAGCAATGAGAAAGATGGTGCTTATGCCAACATTGACATCAACGGAGAAGTAGAATATTACTCAGAATTATTTTTAAAACTTTGCACAATGATAGAAAAGGATATAAGAGAGTTAGATTGCACAACGAAGCATGTGCACGAGGATTTTGAGCAAATTTGTTTGGTGTTTGAACACAAAATTTTGGATCTTTTATTACACGAACTTGTCAATGATATTGTGGAACTTTCATGTTGA 1245 0.388 MAKHEKPQPGCFSGFLRVILCAGTGTSPPVHPSQDESENVDSISNKRDALIHEDFAATPGLVASLMGLDSVPNTNCLMKGHSPDSVPRSRSVNFVDYLLNFEVGQENFHRRAKTSASFREVPASALAYRQQKQDHDLVVFHKWDYNVVKDHEARRESRKFEVGLMKESKQGKKQSKETGERNQRKNKKISKLKNEPRRVPSNSNMNGRKVRKQSEDKDCSSVSSCSSKSYGYRYSSSGGNGDCDSSTGSCSPLLQSKYKKEFVESNLKNKMRKKKSPKKIESDCVSENLSPISVLDVNDSPSLYGTTSLDATQPLPSNSKWKSSPLRSSSDGIEATRSNEKDGAYANIDINGEVEYYSELFLKLCTMIEKDIRELDCTTKHVHEDFEQICLVFEHKILDLLLHELVNDIVELSC* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2301 414 MobiDBLite consensus disorder prediction 159 227 - -
Amo12g2301 414 Pfam DUF761-associated sequence motif 58 75 IPR032795 -
Amo12g2301 414 MobiDBLite consensus disorder prediction 307 333 - -
Amo12g2301 414 MobiDBLite consensus disorder prediction 307 337 - -
Amo12g2301 414 PANTHER ALC-INTERACTING PROTEIN 1 1 413 - -
Amo12g2301 414 PANTHER OS05G0128300 PROTEIN 1 413 - -
Amo12g2301 414 Coils Coil 175 195 - -
Amo12g2301 414 MobiDBLite consensus disorder prediction 159 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2301 Amo-Chr12 103872907 103875600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2301 1 409 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 24.123 1.29e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2301 - - lang:109342337 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2301 12 103872907 103875600 Amo12g2301 12 103872907 103875600 ECH
Amo12g2301 12 103872907 103875600 Amo04g2167 04 92188600 92191991 PCT