Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2283 ATGGCAACTCATCAATTGAACCACATGTTCAAAACATCCATGGTGAAGAATCACAAGAAACAACAACCAAGAACACCAAGGTTCCATGTCTTCAACAATGCAACAACATCTTCAACCACAACTCCTATGAGTGCTAGGAAGCTCATAGAATCTGGCACCGTGAAAACTATATTTCCCAAAGATGCTTCAATTGCCATGAATTCTGAAGGGTTTCTTCTCCTTGATGTTAGGCCAACATGGGAGACAGAGAAGGCACGTGTTGTKGGGTCTGTGCACRTGCCAATCTTTGTTGAAGACACAGATAATAGCCCTGTAACATTACTTAAGAAATGGGTGCATTTTGGTTATATTGGAYTATGGACTGGTCAATATCTAACTACATTGAACCCTGAGTTTCTTGGTCAAGTTGAAGTGGCTATTCCGGATAAGGGTACCAAGGTTCTTGTGGCTTGTGGAGAGGGATTAAGGTCAATGGCAGCAGCTTCAAAGTTATAYAATGGAGGTTACAAAAATCTGGGATGGTTAGCCGGCGGCTTCAGCCGATCAAAGGACGACGACTTCCCTGGGATCGAAGGAACAGAGAAGTTGCAGTATGCTACAGTTGGAGGAGTCTCTTACTATTTTCTTCAGTTGCTTATACTTCTACAAGCAGTGGGTAAATGA 663 0.4253 MATHQLNHMFKTSMVKNHKKQQPRTPRFHVFNNATTSSTTTPMSARKLIESGTVKTIFPKDASIAMNSEGFLLLDVRPTWETEKARVVGSVHXPIFVEDTDNSPVTLLKKWVHFGYIGLWTGQYLTTLNPEFLGQVEVAIPDKGTKVLVACGEGLRSMAAASKLYNGGYKNLGWLAGGFSRSKDDDFPGIEGTEKLQYATVGGVSYYFLQLLILLQAVGK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2283 220 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 49 189 IPR036873 -
Amo12g2283 220 Pfam Rhodanese-like domain 60 181 IPR001763 -
Amo12g2283 220 SMART rhod_4 57 188 IPR001763 -
Amo12g2283 220 Gene3D - 54 201 IPR036873 -
Amo12g2283 220 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 4 220 IPR044614 -
Amo12g2283 220 CDD RHOD 66 180 - -
Amo12g2283 220 ProSiteProfiles Rhodanese domain profile. 67 191 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2283 Amo-Chr12 103260925 103262194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2283 5 207 Sulfurtransferasese or Rhodanese AT3G08920 55.882 2.83e-80 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2283 - - gmx:100795945 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2283 12 103260925 103262194 Amo12g2283 12 103260925 103262194 ECH