Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2272 ATGGCTCGAGTAACAGGTGTCCCAATTTCTTTTCTGCTTGCTAGGGGCCAAAGCATTAAGGTACTTTTTCAACTCCTTAGGAAGGCAAAGCAGAAGAACCTGGTTCTTCCTAATGTAAAACAGGCTGGTTCAGAACAAGGAACATATGAAGGTACCACTGTATTGGAGGCAAGAGCTGGGTTCTATGAAAAGCCAATTGCTACAATAGATTTTGCATCACTATATCCATCTATTATGATGGCCTATAATTTATGTTATTGTACCCTGGTGACTCCTGAAGATGTTCGGAAACTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAATATTTGTTAAATCAAATTTGCAGAAG 363 0.3994 MARVTGVPISFLLARGQSIKVLFQLLRKAKQKNLVLPNVKQAGSEQGTYEGTTVLEARAGFYEKPIATIDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPESVNKTPSGEIFVKSNLQK 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2272 121 SUPERFAMILY DNA/RNA polymerases 16 105 IPR043502 -
Amo12g2272 121 Pfam DNA polymerase family B 7 120 IPR006134 GO:0000166|GO:0003677
Amo12g2272 121 Gene3D - 1 54 IPR036397 GO:0003676
Amo12g2272 121 Gene3D Palm domain of DNA polymerase 55 121 IPR023211 -
Amo12g2272 121 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2272 Amo-Chr12 102993140 102994487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2272 1 121 Core DNA Replication Machinery Family AT5G63960 90.083 5.85e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2272 K02327 - han:110895784 229.18