Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2207 ATGTCTTACTACCAATCAGCAGAAAGAATCCCCGATCCATCATGGAAGTACGATGTGTTTTTCAGTTTCCGAGGCCAAGACACTCGCCACGGATTCACCTCACATCTCTATGACGCTTTGAGGAGAGCTGGGATTTATGTTTTCATTGACGATGAGGTGGTGCTTGGGAGAGGAGACCAGATGACATACACACTGATTCAAGCAATCGAAGCTTCTAGACTTTTTGTTGTTATTTTGACAGAAAGTTATGCTGGTTCTAGATGGTGTCTGGACGAGTTGATGAAAATAATGGAGTGTAGAAGCACTATAGGTCAAACTGTCATTCCGGTATTCTACAATGTTGATCCCGAAGATGTACGCCACCAGAGTGGTCCTTTTGAAGAAGCTTTTCAAAGTCATAGATTCTCATATGAGAATGAGATAGTCCACGCATGGAGGGCTGCGCTCACTGAAGCTGCTAAACTTCCTGGATTTCTAATCACTAGAAACAGTAATGAAGTTGAAATTATCGGAGAGATTGTTGAACATATAACTACTCTACTTGCTTCGGAAGACTTGTTCATCGCAAGGCATCCAGTGGCAGTGCAATCTCGCACGGAAGATGTGATTCAACAGTTACATTCGCATAAACCAGAAGATGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACTATTGCGAAAAGTGTTTATAATCAAATTCGTCACGATTTTGATAGGCCAATGTTCCTCCCAAACATTCAGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGAACAGTTATTGAATGGTATTTGCAAAGCACAGATAAACATACAAAACATCGCATCAGGAGTAGCTTTATTAAGGGAAAAACTTCGCCTGGAAAGCGTATTTCTTGTACTTGATGATGTAAATAATATAGACCAGTTGAATGCCTTGTGCGGTAGTCGAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACAACAAGAGATAGAAATCTGCTTCATATGATTGGAGTTGATTATGTGTACCAAATGACAGAAATGAATTACGATGAAGCTCTTGAACTTTTTTGTTGGAATGCATTTGGGAAAGCAACTCCTTTAACAGAGTTTGCTAGACTTGCAGAAGATGTAGTTAAATATTGTGGGGGATTGCCATTGACCCTTAAACAAGTGGTTGTCAATTGTTTGGAAAGATGA 1206 0.4055 MSYYQSAERIPDPSWKYDVFFSFRGQDTRHGFTSHLYDALRRAGIYVFIDDEVVLGRGDQMTYTLIQAIEASRLFVVILTESYAGSRWCLDELMKIMECRSTIGQTVIPVFYNVDPEDVRHQSGPFEEAFQSHRFSYENEIVHAWRAALTEAAKLPGFLITRNSNEVEIIGEIVEHITTLLASEDLFIARHPVAVQSRTEDVIQQLHSHKPEDVVLMGIWGMGGVGKTTIAKSVYNQIRHDFDRPMFLPNIQEMWENNQQVFLQEQLLNGICKAQINIQNIASGVALLREKLRLESVFLVLDDVNNIDQLNALCGSREWFGAGSIIIITTRDRNLLHMIGVDYVYQMTEMNYDEALELFCWNAFGKATPLTEFARLAEDVVKYCGGLPLTLKQVVVNCLER* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2207 401 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 395 IPR044974 GO:0006952
Amo12g2207 401 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Amo12g2207 401 Gene3D - 12 184 IPR035897 -
Amo12g2207 401 PRINTS Disease resistance protein signature 216 231 - -
Amo12g2207 401 PRINTS Disease resistance protein signature 291 305 - -
Amo12g2207 401 PRINTS Disease resistance protein signature 384 398 - -
Amo12g2207 401 SMART till_3 16 155 IPR000157 GO:0007165
Amo12g2207 401 Pfam NB-ARC domain 198 394 IPR002182 GO:0043531
Amo12g2207 401 Gene3D - 349 396 IPR042197 -
Amo12g2207 401 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 27 395 - -
Amo12g2207 401 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Amo12g2207 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 395 IPR027417 -
Amo12g2207 401 Pfam TIR domain 16 179 IPR000157 GO:0007165
Amo12g2207 401 Gene3D - 185 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2207 Amo-Chr12 101218094 101219622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2207 14 392 WRKY Transcription Factor Family AT4G12020 27.034 4.00e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2207 - - aip:107627636 779.63